RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 ARL2BPQ9Y2Y0 163 aa9.07□□□□□ -0.96
SVIP-205ENST00000533774 TRBV9A0A0B4J1U6 114 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 TMEM213A2RRL7 107 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 PRSS29PA6NIE9 313 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 G3V2T6 193 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 GPX5O75715 221 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 S1PR2O95136 353 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 HOXB6P17509 224 aaKnown RBP9.06□□□□□ -0.96
SVIP-205ENST00000533774 IGFBP3P17936 291 aaPredicted RBP9.06□□□□□ -0.96
SVIP-205ENST00000533774 FCGR2BP31994 310 aaPredicted RBP9.06□□□□□ -0.96
SVIP-205ENST00000533774 ZNF57Q68EA5 555 aaPredicted RBP9.06□□□□□ -0.96
SVIP-205ENST00000533774 GLIPR1L1Q6UWM5 242 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 GVQW1Q8N7I0 195 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 OR13C5Q8NGS8 318 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 Q96M66 194 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 TMEM68Q96MH6 324 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 SULT4A1Q9BR01 284 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 GABARAPL3Q9BY60 117 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 SELENOIQ9C0D9 397 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 C11orf54Q9H0W9 315 aaPredicted RBP9.06□□□□□ -0.96
SVIP-205ENST00000533774 UBQLN2Q9UHD9 624 aa9.06□□□□□ -0.96
SVIP-205ENST00000533774 LRP1BQ9NZR2 4599 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 TRAV8-7A0A075B6U6 113 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 SRRM4A7MD48 611 aaKnown RBP9.05□□□□□ -0.96
SVIP-205ENST00000533774 LGALS9O00182 355 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 GLAP06280 429 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 OR9G9P0C7N8 305 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 MGMTP16455 207 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 APOC4P55056 127 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 ATP5G2Q06055 141 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 FLOT2Q14254 428 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 UXS1Q8NBZ7 420 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 FBLIM1Q8WUP2 373 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 MRPL18Q9H0U6 180 aaKnown RBP9.05□□□□□ -0.96
SVIP-205ENST00000533774 ARGLU1Q9NWB6 273 aaPredicted RBP9.05□□□□□ -0.96
SVIP-205ENST00000533774 ERVK13-1Q9NX77 482 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 OR1A1Q9P1Q5 309 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 STEAP1Q9UHE8 339 aa9.05□□□□□ -0.96
SVIP-205ENST00000533774 FAM90A7PA6NKC0 464 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 UBE2CO00762 179 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 PDCD6O75340 191 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 DCTN3O75935 186 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 PPP3R1P63098 170 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 GPR176Q14439 515 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 RBMS2Q15434 407 aaKnown RBP9.04□□□□□ -0.96
SVIP-205ENST00000533774 ATP6AP1Q15904 470 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 SLC25A30Q5SVS4 291 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 BTNL8Q6UX41 500 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 C19orf35Q6ZS72 473 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 AMIGO2Q86SJ2 522 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 PDPNQ86YL7 162 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 TMEM217Q8N7C4 229 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 GPR148Q8TDV2 347 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 C2CD4CQ8TF44 421 aa9.04□□□□□ -0.96
SVIP-205ENST00000533774 FAM223BA6NKX1 122 aa9.03□□□□□ -0.96
SVIP-205ENST00000533774 FAM229AH3BQW9 127 aa9.03□□□□□ -0.96
SVIP-205ENST00000533774 ITGB1BP1O14713 200 aa9.03□□□□□ -0.96
SVIP-205ENST00000533774 CD2P06729 351 aa9.03□□□□□ -0.96
SVIP-205ENST00000533774 RPL35AP18077 110 aaKnown RBP9.03□□□□□ -0.96
SVIP-205ENST00000533774 GBX2P52951 348 aaPredicted RBP9.03□□□□□ -0.96
SVIP-205ENST00000533774 ZNF880Q6PDB4 577 aa9.03□□□□□ -0.96
SVIP-205ENST00000533774 GPHB5Q86YW7 130 aa9.03□□□□□ -0.96
SVIP-205ENST00000533774 FAM223AQ8IWN6 122 aa9.03□□□□□ -0.96
SVIP-205ENST00000533774 C11orf45Q8TAV5 145 aa9.03□□□□□ -0.96
SVIP-205ENST00000533774 PHB2Q99623 299 aa9.03□□□□□ -0.96
SVIP-205ENST00000533774 FAAP24Q9BTP7 215 aa9.03□□□□□ -0.96
SVIP-205ENST00000533774 SLC35D1Q9NTN3 355 aa9.03□□□□□ -0.96
SVIP-205ENST00000533774 LRRC42Q9Y546 428 aa9.03□□□□□ -0.96
SVIP-205ENST00000533774 AGRNO00468 2067 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 KIR2DL5BA0A0G2JN68 375 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 KIR2DL5BA0A0G2JPC4 375 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 IGLL5B9A064 214 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 GGCTO75223 188 aaKnown RBP9.02□□□□□ -0.97
SVIP-205ENST00000533774 CRTAPO75718 401 aaPredicted RBP9.02□□□□□ -0.97
SVIP-205ENST00000533774 OR2J3O76001 311 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 IGHV3-23P01764 117 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 CALB2P22676 271 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 SNRPGP62308 76 aaKnown RBP9.02□□□□□ -0.97
SVIP-205ENST00000533774 C15orf32Q32M92 178 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 ODF3L2Q3SX64 289 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 KIR2DL5AQ8N109 375 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 STPG3Q8N7X2 389 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 KIR2DL5BQ8NHK3 375 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 THRSPQ92748 146 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 C5orf30Q96GV9 206 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 CCDC140Q96MF4 163 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 ABRACLQ9P1F3 81 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 POMPQ9Y244 141 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 S4R3C0 116 aa9.02□□□□□ -0.97
SVIP-205ENST00000533774 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.97
SVIP-205ENST00000533774 A8MWP6 167 aa9.01□□□□□ -0.97
SVIP-205ENST00000533774 DEFB4AO15263 64 aa9.01□□□□□ -0.97
SVIP-205ENST00000533774 TUSC2O75896 110 aa9.01□□□□□ -0.97
SVIP-205ENST00000533774 NAPSAO96009 420 aa9.01□□□□□ -0.97
SVIP-205ENST00000533774 APOA2P02652 100 aa9.01□□□□□ -0.97
SVIP-205ENST00000533774 IFNA4P05014 189 aa9.01□□□□□ -0.97
SVIP-205ENST00000533774 LIMS3P0CW19 117 aa9.01□□□□□ -0.97
SVIP-205ENST00000533774 LIMS4P0CW20 117 aa9.01□□□□□ -0.97
SVIP-205ENST00000533774 CEACAM6P40199 344 aa9.01□□□□□ -0.97
SVIP-205ENST00000533774 TCTAP57738 103 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms