RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 ECSCRQ19T08 205 aa9.65□□□□□ -0.86
AMBRA1-211ENST00000533727 C1orf100Q5SVJ3 147 aa9.65□□□□□ -0.86
AMBRA1-211ENST00000533727 DNM1P46Q6ZS02 220 aa9.65□□□□□ -0.86
AMBRA1-211ENST00000533727 SSC4DQ8WTU2 575 aa9.65□□□□□ -0.86
AMBRA1-211ENST00000533727 PGLYRP3Q96LB9 341 aa9.65□□□□□ -0.86
AMBRA1-211ENST00000533727 SSBP3Q9BWW4 388 aaPredicted RBP9.65□□□□□ -0.86
AMBRA1-211ENST00000533727 TRAV8-7A0A075B6U6 113 aa9.65□□□□□ -0.86
AMBRA1-211ENST00000533727 MEX3AA1L020 520 aaKnown RBP9.65□□□□□ -0.86
AMBRA1-211ENST00000533727 HOXA4Q00056 320 aaPredicted RBP9.65□□□□□ -0.86
AMBRA1-211ENST00000533727 ZNF260Q3ZCT1 412 aa9.65□□□□□ -0.86
AMBRA1-211ENST00000533727 ALX4Q9H161 411 aaPredicted RBP9.65□□□□□ -0.86
AMBRA1-211ENST00000533727 YAE1D1Q9NRH1 226 aa9.65□□□□□ -0.86
AMBRA1-211ENST00000533727 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.65□□□□□ -0.87
AMBRA1-211ENST00000533727 CDS2O95674 445 aa9.65□□□□□ -0.87
AMBRA1-211ENST00000533727 CA7P43166 264 aa9.65□□□□□ -0.87
AMBRA1-211ENST00000533727 POLR2GP62487 172 aaKnown RBP eCLIP9.65□□□□□ -0.87
AMBRA1-211ENST00000533727 LSM11P83369 360 aaKnown RBP eCLIP9.65□□□□□ -0.87
AMBRA1-211ENST00000533727 MEF2CQ06413 473 aaPredicted RBP9.65□□□□□ -0.87
AMBRA1-211ENST00000533727 OR5P3Q8WZ94 311 aa9.65□□□□□ -0.87
AMBRA1-211ENST00000533727 DEPPQ9NTK1 212 aa9.65□□□□□ -0.87
AMBRA1-211ENST00000533727 A0A1B0GU03 582 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 A0A1W2PS18 150 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 SYNGR2O43760 224 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 EIF3GO75821 320 aaKnown RBP eCLIP9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 GCGP01275 180 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 ZNF660Q6AZW8 331 aaPredicted RBP9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 STXBP6Q8NFX7 210 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 IGHV3-13P01766 116 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 IGHV3-7P01780 117 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 GNLYP22749 145 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 GAPTQ8N292 157 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 LINC00469Q8N7U9 141 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 RHOVQ96L33 236 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 DCAF16Q9NXF7 216 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 CFDP00746 253 aaPredicted RBP9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 ZNF488Q96MN9 340 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 PLSCR4Q9NRQ2 329 aa9.64□□□□□ -0.87
AMBRA1-211ENST00000533727 ZFC3H1O60293 1989 aaKnown RBP9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 ANKRD36A6QL64 1941 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 J3QKU1 62 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 OR2J3O76001 311 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 PPP1CCP36873 323 aaKnown RBP9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 CAMPP49913 170 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 ARF6P62330 175 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 ZNF826PQ6ZT77 177 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 CCL28Q9NRJ3 127 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 GREB1Q4ZG55 1949 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 PQLC2LA1A4F0 135 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 NKX2-6A6NCS4 301 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 IGHG3P01860 377 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 FCGR3AP08637 254 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 DYNLT3P51808 116 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 FAM3BP58499 235 aaPredicted RBP9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 ABHD12Q8N2K0 398 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 TP53RKQ96S44 253 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 C1QTNF5Q9BXJ0 243 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 SPRR3Q9UBC9 169 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 HILPDAQ9Y5L2 63 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 PLXNA3P51805 1871 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 VWA8A3KMH1 1905 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 IQCF6A8MYZ5 107 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 ZG16O60844 167 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 NANOS3P60323 173 aaKnown RBP9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 SNAI3Q3KNW1 292 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 OR1L1Q8NH94 360 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 ZMIZ1Q9ULJ6 1067 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 DIRC3C9JPN6 131 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 LYZP61626 148 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 KHDC3LQ587J8 217 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 LAMTOR1Q6IAA8 161 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 SLC35E4Q6ICL7 350 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 IGFL3Q6UXB1 125 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 LINC00114Q6XXX2 140 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 TMEM91Q6ZNR0 172 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 RGP1Q92546 391 aaPredicted RBP9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 DLL3Q9NYJ7 618 aa9.63□□□□□ -0.87
AMBRA1-211ENST00000533727 A0A1B0GV90 55 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 PF4V1P10720 104 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 LDLRAD3Q86YD5 345 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 LPAR5Q9H1C0 372 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 SRD5A3Q9H8P0 318 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 MPTX1A8MV57 137 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 C11orf94C9JXX5 98 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 J3QR06 171 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 TGFAP01135 160 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 THBDP07204 575 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 OR4A47Q6IF82 309 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 PIKFYVEQ9Y2I7 2098 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 LOC105371267A0A1B0GV96 52 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 KCNAB3O43448 404 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 CHST1O43916 411 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 TBX6O95947 436 aaPredicted RBP9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 REC114Q7Z4M0 266 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 BPIFA4PQ86YQ2 179 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 PARD6GQ9BYG4 376 aaPredicted RBP9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 MBD3L4A6NDZ8 208 aaPredicted RBP9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 MBD3L3A6NE82 208 aaPredicted RBP9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 MBD3L5A6NJ08 208 aaPredicted RBP9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 TRGC2P03986 189 aa9.62□□□□□ -0.87
AMBRA1-211ENST00000533727 NPY1RP25929 384 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms