RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 COL25A1Q9BXS0 654 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-232ENST00000532649 RTN4RQ9BZR6 473 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 RECKO95980 971 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 NANOS3P60323 173 aaKnown RBP7.54□□□□□ -1.2
CTNND1-232ENST00000532649 SUMO2P61956 95 aaKnown RBP7.54□□□□□ -1.2
CTNND1-232ENST00000532649 HLA-DRB3P79483 266 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 OR2T10Q8NGZ9 312 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 SPAG8Q99932 426 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-232ENST00000532649 ST6GALNAC2Q9UJ37 374 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 WIPI2Q9Y4P8 454 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 FBLL1A6NHQ2 334 aaKnown RBP7.54□□□□□ -1.2
CTNND1-232ENST00000532649 ZNF688P0C7X2 276 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 HTN3P15516 51 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 REG1BP48304 166 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 GPR82Q96P67 336 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 SFXN3Q9BWM7 321 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 OR2W1Q9Y3N9 320 aa7.54□□□□□ -1.2
CTNND1-232ENST00000532649 A0A0U1RQV5 110 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 RFPL3SP0C7P2 107 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 VSIG8P0DPA2 414 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 HOXA6P31267 233 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 PLP1P60201 277 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 TMEM255AQ5JRV8 349 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 TEPPQ6URK8 271 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 ERASQ7Z444 233 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 RAB24Q969Q5 203 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 CITED2Q99967 270 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-232ENST00000532649 CYB5R1Q9UHQ9 305 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 ELOA3CA0A087WX78 387 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-232ENST00000532649 K7N7A8 449 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 HPXP02790 462 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 STAG3L3P0CL85 134 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 RPL31P62899 125 aaKnown RBP7.53□□□□□ -1.2
CTNND1-232ENST00000532649 CX3CL1P78423 397 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 TPRP12270 2363 aaKnown RBP7.53□□□□□ -1.2
CTNND1-232ENST00000532649 RBMY1BA6NDE4 496 aaKnown RBP7.53□□□□□ -1.2
CTNND1-232ENST00000532649 RBMY1EA6NEQ0 496 aaKnown RBP7.53□□□□□ -1.2
CTNND1-232ENST00000532649 THY1P04216 161 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 RBMY1DP0C7P1 496 aaKnown RBP7.53□□□□□ -1.2
CTNND1-232ENST00000532649 RBMY1A1P0DJD3 496 aaKnown RBP7.53□□□□□ -1.2
CTNND1-232ENST00000532649 RBMY1CP0DJD4 496 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 ST3GAL2Q16842 350 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 LRRC75AQ8NAA5 344 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 OR8G5Q8NG78 346 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 ABHD17AQ96GS6 310 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 GPX1P07203 203 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 CSRP1P21291 193 aaKnown RBP7.53□□□□□ -1.2
CTNND1-232ENST00000532649 PRDX2P32119 198 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 P2RY1P47900 373 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 RELQ04864 619 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-232ENST00000532649 IRF3Q14653 427 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 CEACAM21Q3KPI0 293 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 LDLRAD3Q86YD5 345 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 OR5AU1Q8NGC0 362 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 ITLN1Q8WWA0 313 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 PRELID3AQ96N28 172 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 SH3BGRL3Q9H299 93 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 RNF122Q9H9V4 155 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 MRPS18AQ9NVS2 196 aaKnown RBP7.53□□□□□ -1.2
CTNND1-232ENST00000532649 CHCHD2Q9Y6H1 151 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-232ENST00000532649 LEUTXA8MZ59 168 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 MALP21145 153 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 COMPP49747 757 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-232ENST00000532649 EEF1AKMT3Q96AZ1 226 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 CCL13Q99616 98 aa7.53□□□□□ -1.2
CTNND1-232ENST00000532649 DNAJC13O75165 2243 aa7.52□□□□□ -1.2
CTNND1-232ENST00000532649 IGLV1-36A0A0B4J1U3 117 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 J3QR06 171 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 KBTBD11O94819 623 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 CELA3AP09093 270 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 PGA5P0DJD9 388 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 BSXQ3C1V8 233 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 SLC16A13Q7RTY0 426 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 MRGPRGQ86SM5 289 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 PHLDA1Q8WV24 401 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-232ENST00000532649 ZNF703Q9H7S9 590 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-232ENST00000532649 ANKRD36A6QL64 1941 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 CACNA1EQ15878 2313 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 IGKV1D-42A0A075B6H8 117 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 RPL36A-HNRNPH2H7BZ11 118 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 OR2A4O95047 310 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 HBZP02008 142 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 CTSDP07339 412 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-232ENST00000532649 CD99P14209 185 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 ANOS1P23352 680 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 RAB32Q13637 225 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 TMEM91Q6ZNR0 172 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 GAPTQ8N292 157 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 ZBTB34Q8NCN2 500 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 OR2A7Q96R45 310 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 AMELYQ99218 206 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 NEU1Q99519 415 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 SOSTQ9BQB4 213 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 RNF115Q9Y4L5 304 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 CCDC88CQ9P219 2028 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 GHRHP01286 108 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 PPYP01298 95 aa7.52□□□□□ -1.21
CTNND1-232ENST00000532649 RBM11P57052 281 aaKnown RBP7.52□□□□□ -1.21
CTNND1-232ENST00000532649 RPS20P60866 119 aaKnown RBP7.52□□□□□ -1.21
CTNND1-232ENST00000532649 PNRC1Q12796 327 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms