RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 ZNF251Q9BRH9 671 aa11.97□□□□□ -0.49
CPSF1-208ENST00000532560 THAP7Q9BT49 309 aaPredicted RBP11.97□□□□□ -0.49
CPSF1-208ENST00000532560 WNT10AQ9GZT5 417 aa11.97□□□□□ -0.49
CPSF1-208ENST00000532560 DIABLOQ9NR28 239 aa11.97□□□□□ -0.49
CPSF1-208ENST00000532560 RDH8Q9NYR8 311 aa11.97□□□□□ -0.49
CPSF1-208ENST00000532560 TRBV6-7A0A0A0MS04 114 aa11.96□□□□□ -0.49
CPSF1-208ENST00000532560 ZNF736B4DX44 427 aaPredicted RBP11.96□□□□□ -0.49
CPSF1-208ENST00000532560 BET1O15155 118 aa11.96□□□□□ -0.49
CPSF1-208ENST00000532560 DHFRP00374 187 aa11.96□□□□□ -0.49
CPSF1-208ENST00000532560 VSIG10L2P0DP72 767 aa11.96□□□□□ -0.49
CPSF1-208ENST00000532560 SLC6A1P30531 599 aa11.96□□□□□ -0.49
CPSF1-208ENST00000532560 MRPS10P82664 201 aaKnown RBP11.96□□□□□ -0.49
CPSF1-208ENST00000532560 TATDN3Q17R31 274 aa11.96□□□□□ -0.49
CPSF1-208ENST00000532560 TMEM95Q3KNT9 176 aa11.96□□□□□ -0.49
CPSF1-208ENST00000532560 PRR31Q5SQ13 230 aa11.96□□□□□ -0.49
CPSF1-208ENST00000532560 OR8H1Q8NGG4 311 aa11.96□□□□□ -0.49
CPSF1-208ENST00000532560 OR10J5Q8NHC4 309 aa11.96□□□□□ -0.49
CPSF1-208ENST00000532560 WIPF2Q8TF74 440 aaPredicted RBP11.96□□□□□ -0.49
CPSF1-208ENST00000532560 TRIM63Q969Q1 353 aa11.96□□□□□ -0.49
CPSF1-208ENST00000532560 NABP2Q9BQ15 211 aa11.96□□□□□ -0.49
CPSF1-208ENST00000532560 SLA2Q9H6Q3 261 aa11.96□□□□□ -0.49
CPSF1-208ENST00000532560 TRAV18A0A075B6X5 111 aa11.95□□□□□ -0.5
CPSF1-208ENST00000532560 IGKV1D-8A0A087WSZ0 117 aa11.95□□□□□ -0.5
CPSF1-208ENST00000532560 LINC00854A0A1B0GVQ3 168 aa11.95□□□□□ -0.5
CPSF1-208ENST00000532560 INMT-MINDY4F8WBC2 141 aa11.95□□□□□ -0.5
CPSF1-208ENST00000532560 SSX5O60225 188 aa11.95□□□□□ -0.5
CPSF1-208ENST00000532560 PEX14O75381 377 aa11.95□□□□□ -0.5
CPSF1-208ENST00000532560 EIF4EP06730 217 aaKnown RBP11.95□□□□□ -0.5
CPSF1-208ENST00000532560 DYRK1AQ13627 763 aa11.95□□□□□ -0.5
CPSF1-208ENST00000532560 CDK10Q15131 360 aa11.95□□□□□ -0.5
CPSF1-208ENST00000532560 RPL39P5Q59GN2 51 aa11.95□□□□□ -0.5
CPSF1-208ENST00000532560 NOXA1Q86UR1 476 aa11.95□□□□□ -0.5
CPSF1-208ENST00000532560 DEDD2Q8WXF8 326 aa11.95□□□□□ -0.5
CPSF1-208ENST00000532560 ABHD14BQ96IU4 210 aa11.95□□□□□ -0.5
CPSF1-208ENST00000532560 NUBP2Q9Y5Y2 271 aa11.95□□□□□ -0.5
CPSF1-208ENST00000532560 NAP1L6A6NFF2 107 aa11.94□□□□□ -0.5
CPSF1-208ENST00000532560 OR5H14A6NHG9 310 aa11.94□□□□□ -0.5
CPSF1-208ENST00000532560 SH2D7A6NKC9 451 aaPredicted RBP11.94□□□□□ -0.5
CPSF1-208ENST00000532560 M0QZ24 198 aa11.94□□□□□ -0.5
CPSF1-208ENST00000532560 XRCC3O43542 346 aa11.94□□□□□ -0.5
CPSF1-208ENST00000532560 CTXN2P0C2S0 81 aa11.94□□□□□ -0.5
CPSF1-208ENST00000532560 AP3S2P59780 193 aa11.94□□□□□ -0.5
CPSF1-208ENST00000532560 RRAS2P62070 204 aaPredicted RBP11.94□□□□□ -0.5
CPSF1-208ENST00000532560 H1FOOQ8IZA3 346 aaPredicted RBP11.94□□□□□ -0.5
CPSF1-208ENST00000532560 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.94□□□□□ -0.5
CPSF1-208ENST00000532560 GRPEL2Q8TAA5 225 aa11.94□□□□□ -0.5
CPSF1-208ENST00000532560 S100A16Q96FQ6 103 aaKnown RBP11.94□□□□□ -0.5
CPSF1-208ENST00000532560 GINS4Q9BRT9 223 aa11.94□□□□□ -0.5
CPSF1-208ENST00000532560 ST6GALNAC5Q9BVH7 336 aa11.94□□□□□ -0.5
CPSF1-208ENST00000532560 AUNIPQ9H7T9 357 aa11.94□□□□□ -0.5
CPSF1-208ENST00000532560 PLSCR3Q9NRY6 295 aa11.94□□□□□ -0.5
CPSF1-208ENST00000532560 ALG5Q9Y673 324 aa11.94□□□□□ -0.5
CPSF1-208ENST00000532560 C1QBP02746 253 aa11.93□□□□□ -0.5
CPSF1-208ENST00000532560 CT45A6P0DMU7 189 aa11.93□□□□□ -0.5
CPSF1-208ENST00000532560 CT45A5P0DMU8 189 aa11.93□□□□□ -0.5
CPSF1-208ENST00000532560 CT45A7P0DMV0 189 aa11.93□□□□□ -0.5
CPSF1-208ENST00000532560 GPR12P47775 334 aa11.93□□□□□ -0.5
CPSF1-208ENST00000532560 C9orf152Q5JTZ5 239 aa11.93□□□□□ -0.5
CPSF1-208ENST00000532560 FAM71E2Q8N5Q1 922 aa11.93□□□□□ -0.5
CPSF1-208ENST00000532560 Q8N9W7 124 aa11.93□□□□□ -0.5
CPSF1-208ENST00000532560 GON7Q9BXV9 100 aa11.93□□□□□ -0.5
CPSF1-208ENST00000532560 LIN7CQ9NUP9 197 aaKnown RBP11.93□□□□□ -0.5
CPSF1-208ENST00000532560 C7orf66A4D0T2 115 aa11.92□□□□□ -0.5
CPSF1-208ENST00000532560 NCBP2LA6PVI3 153 aaKnown RBP11.92□□□□□ -0.5
CPSF1-208ENST00000532560 H0YJW9 148 aa11.92□□□□□ -0.5
CPSF1-208ENST00000532560 FBXO24O75426 580 aa11.92□□□□□ -0.5
CPSF1-208ENST00000532560 ACTBP60709 375 aa11.92□□□□□ -0.5
CPSF1-208ENST00000532560 TMEM69Q5SWH9 247 aa11.92□□□□□ -0.5
CPSF1-208ENST00000532560 TOMM5Q8N4H5 51 aa11.92□□□□□ -0.5
CPSF1-208ENST00000532560 OR2D2Q9H210 308 aa11.92□□□□□ -0.5
CPSF1-208ENST00000532560 ANXA10Q9UJ72 324 aa11.92□□□□□ -0.5
CPSF1-208ENST00000532560 RNF150Q9ULK6 438 aa11.92□□□□□ -0.5
CPSF1-208ENST00000532560 GAB2Q9UQC2 676 aa11.92□□□□□ -0.5
CPSF1-208ENST00000532560 TET2Q6N021 2002 aaPredicted RBP11.91□□□□□ -0.5
CPSF1-208ENST00000532560 A0A0B4J293 547 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 PROP1O75360 226 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 SNAPC5O75971 98 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 IGHG2P01859 326 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 OR8U9P0C7N5 309 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 MC5RP33032 325 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 CBX5P45973 191 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 F2RL1P55085 397 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 IFITM2Q01629 132 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 MMDQ15546 238 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 C2orf68Q2NKX9 166 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 SLC35E3Q7Z769 313 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 OR5AN1Q8NGI8 311 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 OR8U1Q8NH10 309 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 ZFAND1Q8TCF1 268 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 SMIM4Q8WVI0 70 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 RBMXL1Q96E39 390 aaKnown RBP11.91□□□□□ -0.5
CPSF1-208ENST00000532560 ABHD1Q96SE0 405 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 WASHC3Q9Y3C0 194 aa11.91□□□□□ -0.5
CPSF1-208ENST00000532560 RBBP9O75884 186 aa11.9□□□□□ -0.5
CPSF1-208ENST00000532560 PTHLHP12272 177 aa11.9□□□□□ -0.5
CPSF1-208ENST00000532560 TAS2R20P59543 309 aa11.9□□□□□ -0.5
CPSF1-208ENST00000532560 GLDNQ6ZMI3 551 aaPredicted RBP11.9□□□□□ -0.5
CPSF1-208ENST00000532560 HOGA1Q86XE5 327 aa11.9□□□□□ -0.5
CPSF1-208ENST00000532560 GVQW1Q8N7I0 195 aa11.9□□□□□ -0.5
CPSF1-208ENST00000532560 C11orf44Q8N8P7 122 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms