RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 UBE2E2Q96LR5 201 aa13.45□□□□□ -0.26
PHRF1-204ENST00000532550 ST6GALNAC5Q9BVH7 336 aa13.45□□□□□ -0.26
PHRF1-204ENST00000532550 OR2D2Q9H210 308 aa13.45□□□□□ -0.26
PHRF1-204ENST00000532550 KLK15Q9H2R5 256 aa13.45□□□□□ -0.26
PHRF1-204ENST00000532550 SLC35D1Q9NTN3 355 aa13.45□□□□□ -0.26
PHRF1-204ENST00000532550 SDHAF2Q9NX18 166 aa13.45□□□□□ -0.26
PHRF1-204ENST00000532550 ELF5Q9UKW6 265 aaPredicted RBP13.45□□□□□ -0.26
PHRF1-204ENST00000532550 IGKV1-16P04430 117 aa13.44□□□□□ -0.26
PHRF1-204ENST00000532550 DTYMKP23919 212 aa13.44□□□□□ -0.26
PHRF1-204ENST00000532550 KRTAP10-11P60412 298 aa13.44□□□□□ -0.26
PHRF1-204ENST00000532550 PITPNAQ00169 270 aa13.44□□□□□ -0.26
PHRF1-204ENST00000532550 TAGLNQ01995 201 aaKnown RBP13.44□□□□□ -0.26
PHRF1-204ENST00000532550 ZNF562Q6V9R5 426 aa13.44□□□□□ -0.26
PHRF1-204ENST00000532550 TCTEX1D1Q8N7M0 179 aa13.44□□□□□ -0.26
PHRF1-204ENST00000532550 ZNF491Q8N8L2 437 aa13.44□□□□□ -0.26
PHRF1-204ENST00000532550 OR11H1Q8NG94 326 aa13.44□□□□□ -0.26
PHRF1-204ENST00000532550 OR5M8Q8NGP6 311 aa13.44□□□□□ -0.26
PHRF1-204ENST00000532550 ZMAT5Q9UDW3 170 aaKnown RBP13.44□□□□□ -0.26
PHRF1-204ENST00000532550 VSIG4Q9Y279 399 aa13.44□□□□□ -0.26
PHRF1-204ENST00000532550 NUBP2Q9Y5Y2 271 aa13.44□□□□□ -0.26
PHRF1-204ENST00000532550 A3GALT2U3KPV4 340 aa13.44□□□□□ -0.26
PHRF1-204ENST00000532550 A0A1W2PN81 502 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 SPDEFO95238 335 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 CTXN2P0C2S0 81 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 CLEC2LP0C7M8 214 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 CHRNA7P36544 502 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 LGALS7P47929 136 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 EGFEM1PQ0D2K5 195 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 CBX3Q13185 183 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 KIAA0141Q14154 515 aaPredicted RBP13.43□□□□□ -0.26
PHRF1-204ENST00000532550 DEFB121Q5J5C9 76 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 PPP1R27Q86WC6 154 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 LGALS14Q8TCE9 139 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 MYOZ3Q8TDC0 251 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 DCSTAMPQ9H295 470 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 RNF167Q9H6Y7 350 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 FOXA2Q9Y261 457 aaPredicted RBP13.43□□□□□ -0.26
PHRF1-204ENST00000532550 FBXO7Q9Y3I1 522 aa13.43□□□□□ -0.26
PHRF1-204ENST00000532550 DNAH3Q8TD57 4116 aa13.42□□□□□ -0.26
PHRF1-204ENST00000532550 IGKV1D-8A0A087WSZ0 117 aa13.42□□□□□ -0.26
PHRF1-204ENST00000532550 CA2P00918 260 aa13.42□□□□□ -0.26
PHRF1-204ENST00000532550 CD40LGP29965 261 aa13.42□□□□□ -0.26
PHRF1-204ENST00000532550 CRIP2P52943 208 aaPredicted RBP13.42□□□□□ -0.26
PHRF1-204ENST00000532550 GNG2P59768 71 aa13.42□□□□□ -0.26
PHRF1-204ENST00000532550 NDPQ00604 133 aa13.42□□□□□ -0.26
PHRF1-204ENST00000532550 AKIRIN2Q53H80 203 aa13.42□□□□□ -0.26
PHRF1-204ENST00000532550 IDNKQ5T6J7 187 aa13.42□□□□□ -0.26
PHRF1-204ENST00000532550 UNQ5815/PRO19632Q6UWF5 114 aa13.42□□□□□ -0.26
PHRF1-204ENST00000532550 H1FOOQ8IZA3 346 aaPredicted RBP13.42□□□□□ -0.26
PHRF1-204ENST00000532550 OR1N2Q8NGR9 330 aa13.42□□□□□ -0.26
PHRF1-204ENST00000532550 OR5B12Q96R08 314 aa13.42□□□□□ -0.26
PHRF1-204ENST00000532550 RHBDL2Q9NX52 303 aa13.42□□□□□ -0.26
PHRF1-204ENST00000532550 TMEM235A6NFC5 223 aa13.41□□□□□ -0.26
PHRF1-204ENST00000532550 K7EIL1 84 aa13.41□□□□□ -0.26
PHRF1-204ENST00000532550 SLC25A17O43808 307 aa13.41□□□□□ -0.26
PHRF1-204ENST00000532550 RRASP10301 218 aa13.41□□□□□ -0.26
PHRF1-204ENST00000532550 EGR2P11161 476 aaPredicted RBP13.41□□□□□ -0.26
PHRF1-204ENST00000532550 SCAND1P57086 179 aa13.41□□□□□ -0.26
PHRF1-204ENST00000532550 RTL8BQ17RB0 113 aa13.41□□□□□ -0.26
PHRF1-204ENST00000532550 ZNF260Q3ZCT1 412 aa13.41□□□□□ -0.26
PHRF1-204ENST00000532550 ACTBL2Q562R1 376 aa13.41□□□□□ -0.26
PHRF1-204ENST00000532550 BVESQ8NE79 360 aa13.41□□□□□ -0.26
PHRF1-204ENST00000532550 LFNGQ8NES3 379 aa13.41□□□□□ -0.26
PHRF1-204ENST00000532550 NUDCD2Q8WVJ2 157 aa13.41□□□□□ -0.26
PHRF1-204ENST00000532550 FAM103A1Q9BTL3 118 aaKnown RBP13.41□□□□□ -0.26
PHRF1-204ENST00000532550 GNB4Q9HAV0 340 aa13.41□□□□□ -0.26
PHRF1-204ENST00000532550 ETV7Q9Y603 341 aa13.41□□□□□ -0.26
PHRF1-204ENST00000532550 WI2-2373I1.2A0A1W2PRP0 233 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 I3L521 148 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 J3QRK9 145 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 SHOXO15266 292 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 CNIH1O95406 144 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 RUNX1Q01196 453 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 FXYD3Q14802 87 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 TIMM50Q3ZCQ8 353 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 C19orf54Q5BKX5 351 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 C9orf66Q5T8R8 295 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 PYHIN1Q6K0P9 492 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 CNIH2Q6PI25 160 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 ARPC1AQ92747 370 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 ADTRPQ96IZ2 230 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 VCX3AQ9NNX9 186 aa13.4□□□□□ -0.26
PHRF1-204ENST00000532550 TRAV18A0A075B6X5 111 aa13.39□□□□□ -0.27
PHRF1-204ENST00000532550 A0A087WXM4 84 aa13.39□□□□□ -0.27
PHRF1-204ENST00000532550 SOX15O60248 233 aa13.39□□□□□ -0.27
PHRF1-204ENST00000532550 OR8U8P0C7N1 319 aa13.39□□□□□ -0.27
PHRF1-204ENST00000532550 LUMP51884 338 aaPredicted RBP13.39□□□□□ -0.27
PHRF1-204ENST00000532550 DGCR2P98153 550 aa13.39□□□□□ -0.27
PHRF1-204ENST00000532550 ZNF616Q08AN1 781 aa13.39□□□□□ -0.27
PHRF1-204ENST00000532550 FHL3Q13643 280 aa13.39□□□□□ -0.27
PHRF1-204ENST00000532550 TMEM177Q53S58 311 aa13.39□□□□□ -0.27
PHRF1-204ENST00000532550 OR5H6Q8NGV6 325 aa13.39□□□□□ -0.27
PHRF1-204ENST00000532550 CASTOR1Q8WTX7 329 aa13.39□□□□□ -0.27
PHRF1-204ENST00000532550 HARBI1Q96MB7 349 aa13.39□□□□□ -0.27
PHRF1-204ENST00000532550 DIABLOQ9NR28 239 aa13.39□□□□□ -0.27
PHRF1-204ENST00000532550 OR2W1Q9Y3N9 320 aa13.39□□□□□ -0.27
PHRF1-204ENST00000532550 SEC14L6B5MCN3 397 aa13.38□□□□□ -0.27
PHRF1-204ENST00000532550 RAMP3O60896 148 aa13.38□□□□□ -0.27
PHRF1-204ENST00000532550 TMEM127O75204 238 aa13.38□□□□□ -0.27
PHRF1-204ENST00000532550 SLC22A5O76082 557 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms