RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 SPATA46Q5T0L3 261 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 TPTE2P1Q5T6R2 138 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 TEX43Q6ZNM6 134 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 TUSC5Q8IXB3 177 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 RDH5Q92781 318 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 YPEL2Q96QA6 119 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 MTCH1Q9NZJ7 389 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 DOCK11Q5JSL3 2073 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A10PA6NDY2 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A18PA6NE21 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A16PA6NEW6 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A20PA6NIJ5 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A8PA6NJQ4 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A7PA6NKC0 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A22PA8MWA6 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A12PA8MX19 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A5PA8MXJ8 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A23PA8MXZ1 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A15PP0C7V4 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A13PP0C7W8 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A14PP0C7W9 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 FAM90A24PP0C7X0 464 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 EGR1P18146 543 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 NPPCP23582 126 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 CD82P27701 267 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 TRIM61Q5EBN2 209 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 TMEM144Q7Z5S9 345 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 LINC01551Q86U37 167 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 ARL6IP6Q8N6S5 226 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 LSM10Q969L4 123 aaKnown RBP12.56□□□□□ -0.4
NXF1-213ENST00000532297 VAMP8Q9BV40 100 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 PATZ1Q9HBE1 687 aaKnown RBP12.56□□□□□ -0.4
NXF1-213ENST00000532297 TIMM9Q9Y5J7 89 aa12.56□□□□□ -0.4
NXF1-213ENST00000532297 C11orf94C9JXX5 98 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 NTN3O00634 580 aaPredicted RBP12.55□□□□□ -0.4
NXF1-213ENST00000532297 MPLP40238 635 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 SOX8P57073 446 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 TPPP2P59282 170 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 VN1R17PQ8TDU5 208 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 CT55Q8WUE5 264 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 SPSB4Q96A44 273 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 C1QTNF5Q9BXJ0 243 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 MLNRO43193 412 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 CDKN1AP38936 164 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 GNG10P50151 68 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 ZXDAP98168 799 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 TRA2AQ13595 282 aaKnown RBP eCLIP12.55□□□□□ -0.46e-8■■■■□ 25.7
NXF1-213ENST00000532297 ZNF324BQ6AW86 544 aaPredicted RBP12.55□□□□□ -0.4
NXF1-213ENST00000532297 IL1F10Q8WWZ1 152 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 BTF3L4Q96K17 158 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 PRDM14Q9GZV8 571 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 PPP1R3CQ9UQK1 317 aa12.55□□□□□ -0.4
NXF1-213ENST00000532297 CLDN1O95832 211 aa12.54□□□□□ -0.4
NXF1-213ENST00000532297 FGF12P61328 243 aa12.54□□□□□ -0.4
NXF1-213ENST00000532297 RANP62826 216 aaKnown RBP12.54□□□□□ -0.4
NXF1-213ENST00000532297 FFAR4Q5NUL3 377 aa12.54□□□□□ -0.4
NXF1-213ENST00000532297 SGMS2Q8NHU3 365 aa12.54□□□□□ -0.4
NXF1-213ENST00000532297 HSPB9Q9BQS6 159 aa12.54□□□□□ -0.4
NXF1-213ENST00000532297 TMEM9BQ9NQ34 198 aa12.54□□□□□ -0.4
NXF1-213ENST00000532297 RYDENQ9NUL5 291 aaKnown RBP12.54□□□□□ -0.4
NXF1-213ENST00000532297 CRYAAP02489 173 aa12.54□□□□□ -0.4
NXF1-213ENST00000532297 DEFA4P12838 97 aa12.54□□□□□ -0.4
NXF1-213ENST00000532297 BMP5P22003 454 aa12.54□□□□□ -0.4
NXF1-213ENST00000532297 COL5A1-AS1Q5SY13 56 aa12.54□□□□□ -0.4
NXF1-213ENST00000532297 ZDHHC11Q9H8X9 412 aa12.54□□□□□ -0.4
NXF1-213ENST00000532297 ASCL3Q9NQ33 180 aa12.54□□□□□ -0.4
NXF1-213ENST00000532297 ELOVL5Q9NYP7 299 aa12.54□□□□□ -0.4
NXF1-213ENST00000532297 MRPL33O75394 65 aaKnown RBP12.53□□□□□ -0.4
NXF1-213ENST00000532297 C1QTNF9P0C862 333 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 PAFAH1B2P68402 229 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 C11orf42Q8N5U0 333 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 Q8NFD4 153 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 DNAJC4Q9NNZ3 241 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 ZFP30Q9Y2G7 519 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 PGPEP1LA6NFU8 196 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 CD99P14209 185 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 MAGEA5P43359 124 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 RAB7AP51149 207 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 FOXL1Q12952 345 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 FAM53AQ6NSI3 398 aaPredicted RBP12.53□□□□□ -0.4
NXF1-213ENST00000532297 LINC00696Q6ZRV3 163 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 NUFIP2Q7Z417 695 aaKnown RBP12.53□□□□□ -0.4
NXF1-213ENST00000532297 PSMF1Q92530 271 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 C12orf49Q9H741 205 aa12.53□□□□□ -0.4
NXF1-213ENST00000532297 RHBDL1O75783 438 aa12.52□□□□□ -0.4
NXF1-213ENST00000532297 COX5AP20674 150 aa12.52□□□□□ -0.4
NXF1-213ENST00000532297 GFRA1P56159 465 aa12.52□□□□□ -0.4
NXF1-213ENST00000532297 DERL1Q9BUN8 251 aa12.52□□□□□ -0.4
NXF1-213ENST00000532297 RIMS4Q9H426 269 aaPredicted RBP12.52□□□□□ -0.4
NXF1-213ENST00000532297 OR1A1Q9P1Q5 309 aa12.52□□□□□ -0.4
NXF1-213ENST00000532297 TP53TG3Q9ULZ0 132 aa12.52□□□□□ -0.4
NXF1-213ENST00000532297 CYB561P49447 251 aa12.52□□□□□ -0.41
NXF1-213ENST00000532297 TMEM14EPQ6UXP3 125 aa12.52□□□□□ -0.41
NXF1-213ENST00000532297 MRPL21Q7Z2W9 205 aaKnown RBP12.52□□□□□ -0.41
NXF1-213ENST00000532297 RBM7Q9Y580 266 aaKnown RBP12.52□□□□□ -0.41
NXF1-213ENST00000532297 TRAPPC2LH3BP13 241 aa12.52□□□□□ -0.41
NXF1-213ENST00000532297 SERF1AO75920 110 aa12.52□□□□□ -0.41
NXF1-213ENST00000532297 NDUFB4O95168 129 aa12.52□□□□□ -0.41
NXF1-213ENST00000532297 WNT2P09544 360 aa12.52□□□□□ -0.41
NXF1-213ENST00000532297 CHRNB4P30926 498 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms