RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 LCTP09848 1927 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 FOCADQ5VW36 1801 aa1.52□□□□□ -2.17
CD44-233ENST00000531141 DIDO1Q9BTC0 2240 aaKnown RBP1.51□□□□□ -2.17
CD44-233ENST00000531141 CCDC171Q6TFL3 1326 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 PTPRDP23468 1912 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 TRAV8-7A0A075B6U6 113 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 ANKRD20A5PA0PJZ0 165 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 TMEM213A2RRL7 107 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 MGAT4DA6NG13 374 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 TRPC5OSA6NMA1 111 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 OR2AT4A6NND4 320 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 C17orf51A8MQB3 221 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 F5H5P2 479 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 RNASEK-C17orf49H0YIS7 233 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 K7EQS6 105 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 ISLRO14498 428 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 PRMT5O14744 637 aaPredicted RBP1.51□□□□□ -2.17
CD44-233ENST00000531141 GYG2O15488 501 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 COX7A2P2O60397 106 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 ZMPSTE24O75844 475 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 TNFSF15O95150 251 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 CST4P01036 141 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 CTSGP08311 255 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 CECR9P0C854 216 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 NQO2P16083 231 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 CBR1P16152 277 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 IMPA1P29218 277 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 S100A5P33763 92 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 ARR3P36575 388 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 CCR2P41597 374 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 LGALS7P47929 136 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 PLTPP55058 493 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 MRPS15P82914 257 aaKnown RBP1.51□□□□□ -2.17
CD44-233ENST00000531141 STX3Q13277 289 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 TAL2Q16559 108 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 NDUFAF6Q330K2 333 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 UBE2NLQ5JXB2 153 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 LYZL2Q7Z4W2 148 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 LINC00596Q86U02 117 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 LYPD6Q86Y78 171 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 OR4A15Q8NGL6 344 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 OR2K2Q8NGT1 345 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 OR6N2Q8NGY6 317 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 C2orf15Q8WU43 125 aaKnown RBP1.51□□□□□ -2.17
CD44-233ENST00000531141 TMEM239Q8WW34 195 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 SLC25A44Q96H78 314 aaPredicted RBP1.51□□□□□ -2.17
CD44-233ENST00000531141 TRIB3Q96RU7 358 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 KLF6Q99612 283 aaPredicted RBP1.51□□□□□ -2.17
CD44-233ENST00000531141 SMR3AQ99954 134 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 NDEL1Q9GZM8 345 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 UCK1Q9HA47 277 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 C12orf4Q9NQ89 552 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 ANXA10Q9UJ72 324 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 PSMD13Q9UNM6 376 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 ZNF443Q9Y2A4 671 aaPredicted RBP1.51□□□□□ -2.17
CD44-233ENST00000531141 RBMX2Q9Y388 322 aaKnown RBP1.51□□□□□ -2.17
CD44-233ENST00000531141 FADS3Q9Y5Q0 445 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 MGAM2Q2M2H8 2515 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 COL4A2P08572 1712 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 HYDINQ4G0P3 5121 aa1.51□□□□□ -2.17
CD44-233ENST00000531141 SONP18583 2426 aaKnown RBP1.5□□□□□ -2.17
CD44-233ENST00000531141 MYH8P13535 1937 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 WNK1Q9H4A3 2382 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 A0A0B4J2C4 111 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 A0A1B0GU33 70 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 A0A1W2PNM2 257 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 RFXANKO14593 260 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 ITGB1BP1O14713 200 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 ZNF73O43830 326 aaPredicted RBP1.5□□□□□ -2.17
CD44-233ENST00000531141 GMDSO60547 372 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 MYO1DO94832 1006 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 RLN2P04090 185 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 OCMP0CE72 109 aaPredicted RBP1.5□□□□□ -2.17
CD44-233ENST00000531141 COX6B1P14854 86 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 PSMB6P28072 239 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 IL12BP29460 328 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 PSMD8P48556 350 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 DNASE1L1P49184 302 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 IFFO1Q0D2I5 559 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 SRSF6Q13247 344 aaKnown RBP1.5□□□□□ -2.17
CD44-233ENST00000531141 DHRS2Q13268 280 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 DYNC1I2Q13409 638 aaKnown RBP1.5□□□□□ -2.17
CD44-233ENST00000531141 RGS21Q2M5E4 152 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 Q499Y3 187 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 C6orf183Q5T699 404 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 TMEM215Q68D42 235 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 ZNF773Q6PK81 442 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 DPPA2Q7Z7J5 298 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 CYP4Z1Q86W10 505 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 SYS1Q8N2H4 156 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 OR51Q1Q8NH59 317 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 LGALS14Q8TCE9 139 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 DOK4Q8TEW6 326 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 CACNG8Q8WXS5 425 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 C22orf15Q8WYQ4 148 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 OR5P3Q8WZ94 311 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 MED10Q9BTT4 135 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 HINT2Q9BX68 163 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 SPZ1Q9BXG8 430 aa1.5□□□□□ -2.17
CD44-233ENST00000531141 CHRNA10Q9GZZ6 450 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms