RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 MLF2Q15773 248 aaPredicted RBP6.58□□□□□ -1.36
PTPRK-219ENST00000531050 DEFB134Q4QY38 66 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 SPATA31B1PQ5VZV4 182 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 LILRA6Q6PI73 481 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 INO80CQ6PI98 192 aaPredicted RBP6.58□□□□□ -1.36
PTPRK-219ENST00000531050 Q6ZSR6 202 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 OR2A5Q96R48 311 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 NAA38Q9BRA0 125 aaKnown RBP6.58□□□□□ -1.36
PTPRK-219ENST00000531050 SCRT2Q9NQ03 307 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 JPT1Q9UK76 154 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 DOCK11Q5JSL3 2073 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 FREM3P0C091 2139 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 TRBV7-9A0A0J9YWB2 115 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 LRP5LA4QPB2 252 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 LIPT2A6NK58 231 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 H3BRM9 83 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 H3BUT2 72 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 LAMTOR5O43504 91 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 ZNF207O43670 478 aaKnown RBP6.58□□□□□ -1.36
PTPRK-219ENST00000531050 PDE6DO43924 150 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 PEBP1P30086 187 aaKnown RBP6.58□□□□□ -1.36
PTPRK-219ENST00000531050 GPM6AP51674 278 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 SEC11AP67812 179 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 KISS1Q15726 138 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 TNXAQ16473 311 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 HNRNPA1L2Q32P51 320 aaKnown RBP6.58□□□□□ -1.36
PTPRK-219ENST00000531050 TMEM215Q68D42 235 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 TMEFF1Q8IYR6 380 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 OCC1Q8TAD7 63 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 GPHA2Q96T91 129 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 C19orf24Q9BVV8 132 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 HS3ST3A1Q9Y663 406 aa6.58□□□□□ -1.36
PTPRK-219ENST00000531050 A0A0G2JRQ6 117 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 OR4C46A6NHA9 309 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 K7EN84 100 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 CCL16O15467 120 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 MT-ND6P03923 174 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 SLC25A6P12236 298 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 GPR183P32249 361 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 FOXI2Q6ZQN5 318 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 C2orf91Q6ZV80 131 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 MMD2Q8IY49 270 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 TSTD1Q8NFU3 115 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 OR5A1Q8NGJ0 315 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 OR10G9Q8NGN4 311 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 OR10G7Q8NGN6 311 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 OR10AG1Q8NH19 301 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 ZNF296Q8WUU4 475 aaPredicted RBP6.57□□□□□ -1.36
PTPRK-219ENST00000531050 RAB40CQ96S21 281 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 QTRT1Q9BXR0 403 aaKnown RBP6.57□□□□□ -1.36
PTPRK-219ENST00000531050 RNF208Q9H0X6 261 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 TXNIPQ9H3M7 391 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 SLC17A4Q9Y2C5 497 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 TIMM9Q9Y5J7 89 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 GTF3C1Q12789 2109 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 SHANK1Q9Y566 2161 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 UBE2L5PA0A1B0GUS4 154 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 IGHG1P01857 330 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 HERV-K104P61576 105 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 DPTQ07507 201 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 DLX2Q07687 328 aaPredicted RBP6.57□□□□□ -1.36
PTPRK-219ENST00000531050 NNATQ16517 81 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 NRN1LQ496H8 165 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 SLC35E4Q6ICL7 350 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 OR1F12Q8NHA8 337 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 BAHD1Q8TBE0 780 aaPredicted RBP6.57□□□□□ -1.36
PTPRK-219ENST00000531050 C18orf32Q8TCD1 76 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 CYB5D2Q8WUJ1 264 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 IRF7Q92985 503 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 Q96M66 194 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 HIF1ANQ9NWT6 349 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 IL36GQ9NZH8 169 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 ARL2-SNX15V9GYD0 113 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 COL4A2P08572 1712 aa6.57□□□□□ -1.36
PTPRK-219ENST00000531050 IGKV1D-43A0A0B4J1Z2 117 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 ANKRD30BLA7E2S9 258 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 TNFRSF13BO14836 293 aaPredicted RBP6.56□□□□□ -1.36
PTPRK-219ENST00000531050 DXOO77932 396 aaKnown RBP6.56□□□□□ -1.36
PTPRK-219ENST00000531050 PPYP01298 95 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 ADH4P08319 380 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 SMIM10L1P0DMW3 83 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 CYB561P49447 251 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 PMP22Q01453 160 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 LY6G5CQ5SRR4 150 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 MTURNQ8N3F0 131 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 NEU4Q8WWR8 484 aaPredicted RBP6.56□□□□□ -1.36
PTPRK-219ENST00000531050 SMIM10Q96HG1 83 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 VSTM2LQ96N03 204 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 AP1S3Q96PC3 154 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 WDR54Q9H977 334 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 BOKQ9UMX3 212 aaPredicted RBP6.56□□□□□ -1.36
PTPRK-219ENST00000531050 ARHGAP21Q5T5U3 1957 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 A0A0G2JLM5 398 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 ZNF816-ZNF321PA0A0X1KG74 233 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 M0R2Z0 102 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 HRKO00198 91 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 B3GALT2O43825 422 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 SPINK4O60575 86 aa6.56□□□□□ -1.36
PTPRK-219ENST00000531050 SNRNP200O75643 2136 aaKnown RBP6.56□□□□□ -1.36
PTPRK-219ENST00000531050 WISP1O95388 367 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms