RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 UBE2J1Q9Y385 318 aaPredicted RBP12.19□□□□□ -0.46
NR1H3-231ENST00000529540 MMP24Q9Y5R2 645 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 WSB1Q9Y6I7 421 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 LOC102723971A0A1B0GUV8 181 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 ZNF727A8MUV8 499 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 H0YL77 283 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 IFNL4K9M1U5 179 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 SSSCA1O60232 199 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 IGHV1-46P01743 117 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 UCP1P25874 307 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 GNRHRP30968 328 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 DYNLT3P51808 116 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 AKR1C8PQ5T2L2 129 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 OR5C1Q8NGR4 320 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 PLPPR1Q8TBJ4 325 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 SLAMF9Q96A28 289 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 ATP5SQ99766 215 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 NIPSNAP3BQ9BS92 247 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 OR51I2Q9H344 312 aa12.19□□□□□ -0.46
NR1H3-231ENST00000529540 J3QT63 122 aa12.18□□□□□ -0.46
NR1H3-231ENST00000529540 RND2P52198 227 aa12.18□□□□□ -0.46
NR1H3-231ENST00000529540 TAS2R30P59541 319 aa12.18□□□□□ -0.46
NR1H3-231ENST00000529540 ZNF154Q13106 437 aa12.18□□□□□ -0.46
NR1H3-231ENST00000529540 C11orf71Q6IPW1 123 aa12.18□□□□□ -0.46
NR1H3-231ENST00000529540 Q8IYB0 196 aa12.18□□□□□ -0.46
NR1H3-231ENST00000529540 CYB561D1Q8N8Q1 229 aa12.18□□□□□ -0.46
NR1H3-231ENST00000529540 MEGF10Q96KG7 1140 aa12.18□□□□□ -0.46
NR1H3-231ENST00000529540 OR2V2Q96R30 315 aa12.18□□□□□ -0.46
NR1H3-231ENST00000529540 SAP30LQ9HAJ7 183 aa12.18□□□□□ -0.46
NR1H3-231ENST00000529540 LRRK2Q5S007 2527 aa12.18□□□□□ -0.46
NR1H3-231ENST00000529540 PIGBOS1A0A0B4J2F0 54 aa12.17□□□□□ -0.46
NR1H3-231ENST00000529540 ADAM20O43506 726 aa12.17□□□□□ -0.46
NR1H3-231ENST00000529540 TUSC2O75896 110 aa12.17□□□□□ -0.46
NR1H3-231ENST00000529540 DFFBO76075 338 aa12.17□□□□□ -0.46
NR1H3-231ENST00000529540 VDAC1P21796 283 aa12.17□□□□□ -0.46
NR1H3-231ENST00000529540 BRICD5Q6PL45 260 aa12.17□□□□□ -0.46
NR1H3-231ENST00000529540 OR5D13Q8NGL4 314 aa12.17□□□□□ -0.46
NR1H3-231ENST00000529540 NEU4Q8WWR8 484 aaPredicted RBP12.17□□□□□ -0.46
NR1H3-231ENST00000529540 Q9N2K0 584 aa12.17□□□□□ -0.46
NR1H3-231ENST00000529540 TMEM242Q9NWH2 141 aa12.17□□□□□ -0.46
NR1H3-231ENST00000529540 LAMP3Q9UQV4 416 aa12.17□□□□□ -0.46
NR1H3-231ENST00000529540 RFNGQ9Y644 331 aa12.17□□□□□ -0.46
NR1H3-231ENST00000529540 PLCE1Q9P212 2302 aa12.17□□□□□ -0.46
NR1H3-231ENST00000529540 A0A1W2PPR1 153 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 LRRC30A6NM36 301 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 HIST1H2BKO60814 126 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 HIST1H2BJP06899 126 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 SOD3P08294 240 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 SLC25A6P12236 298 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 HIST1H2BOP23527 126 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 HIST1H2BBP33778 126 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 NPBWR2P48146 333 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 HIST1H2BDP58876 126 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 ERVFRD-1P60508 538 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 HIST1H2BCP62807 126 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 HLA-DRB3P79483 266 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 PNRC1Q12796 327 aaPredicted RBP12.16□□□□□ -0.46
NR1H3-231ENST00000529540 HIST2H2BEQ16778 126 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 CXorf66Q5JRM2 361 aaPredicted RBP12.16□□□□□ -0.46
NR1H3-231ENST00000529540 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.16□□□□□ -0.46
NR1H3-231ENST00000529540 ZNF343Q6P1L6 599 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 HIST3H2BBQ8N257 126 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 ZNF383Q8NA42 475 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 HIST1H2BHQ93079 126 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 PFDN5Q99471 154 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 HIST1H2BNQ99877 126 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 HIST1H2BMQ99879 126 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 H0Y980 276 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 TRAPPC2LH3BP13 241 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 TMEM50AO95807 157 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 GRPP07492 148 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 WNT2P09544 360 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 IRF2P14316 349 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 EPHA1P21709 976 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 CFHR2P36980 270 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 SPNS3Q6ZMD2 512 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 CMTM1Q8IZ96 169 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 C1orf87Q8N0U7 546 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 SCCPDHQ8NBX0 429 aa12.16□□□□□ -0.46
NR1H3-231ENST00000529540 RCC1LQ96I51 464 aaKnown RBP12.16□□□□□ -0.46
NR1H3-231ENST00000529540 COL12A1Q99715 3063 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 TGIF2-C20orf24A0A0A6YYL0 155 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 PPP1R2P9O14990 202 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 NAPSAO96009 420 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 TK1P04183 234 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 CTXN2P0C2S0 81 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 HIST1H1BP16401 226 aaKnown RBP12.15□□□□□ -0.46
NR1H3-231ENST00000529540 OMGP23515 440 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 PAX9P55771 341 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 RPL23AP62750 156 aaKnown RBP12.15□□□□□ -0.46
NR1H3-231ENST00000529540 MRPS11P82912 194 aaKnown RBP12.15□□□□□ -0.46
NR1H3-231ENST00000529540 FIP1L1Q6UN15 594 aaKnown RBP12.15□□□□□ -0.46
NR1H3-231ENST00000529540 SLC25A26Q70HW3 274 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 CALHM1Q8IU99 346 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 H1FOOQ8IZA3 346 aaPredicted RBP12.15□□□□□ -0.46
NR1H3-231ENST00000529540 ZNF295-AS1Q8N0V1 137 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 Q8TCH9 128 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 ITLN1Q8WWA0 313 aa12.15□□□□□ -0.46
NR1H3-231ENST00000529540 FGF23Q9GZV9 251 aaPredicted RBP12.15□□□□□ -0.46
NR1H3-231ENST00000529540 MAGT1Q9H0U3 335 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms