RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 OR51J1Q9H342 316 aa7.15□□□□□ -1.26
CMTM1-210ENST00000528441 RSL24D1Q9UHA3 163 aaKnown RBP7.15□□□□□ -1.26
CMTM1-210ENST00000528441 CMYA5Q8N3K9 4069 aa7.15□□□□□ -1.27
CMTM1-210ENST00000528441 TMEM235A6NFC5 223 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 G3V318 75 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 H0YJW9 148 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 CCL24O00175 119 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 MFNGO00587 321 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 ITGB1BP1O14713 200 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 LDLRAD4O15165 306 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 MPPED1O15442 326 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 CA2P00918 260 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 HLA-DRB1P01911 266 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 CLEC2LP0C7M8 214 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 CT45A6P0DMU7 189 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 CT45A5P0DMU8 189 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 CT45A7P0DMV0 189 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 SLC6A1P30531 599 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 HOXD3P31249 432 aaPredicted RBP7.14□□□□□ -1.27
CMTM1-210ENST00000528441 FGF9P31371 208 aaPredicted RBP7.14□□□□□ -1.27
CMTM1-210ENST00000528441 THBS3P49746 956 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 PITPNAQ00169 270 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 FOXE3Q13461 319 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 CD200R1LQ6Q8B3 271 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 UNQ5815/PRO19632Q6UWF5 114 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 ANKRD13BQ86YJ7 626 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 PDPNQ86YL7 162 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 OR5M8Q8NGP6 311 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 RAB2BQ8WUD1 216 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 NUDCD2Q8WVJ2 157 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 FAM103A1Q9BTL3 118 aaKnown RBP7.14□□□□□ -1.27
CMTM1-210ENST00000528441 RNF167Q9H6Y7 350 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 PLSCR3Q9NRY6 295 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 RHBDL2Q9NX52 303 aa7.14□□□□□ -1.27
CMTM1-210ENST00000528441 TRAV18A0A075B6X5 111 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 IGHV7-81A0A0B4J1V7 117 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 FOXI3A8MTJ6 420 aaPredicted RBP7.13□□□□□ -1.27
CMTM1-210ENST00000528441 RAB27BO00194 218 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 SLC25A17O43808 307 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 AIREO43918 545 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 TUSC2O75896 110 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 ACTL6BO94805 426 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 LY86O95711 162 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 FCER2P06734 321 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 LUMP51884 338 aaPredicted RBP7.13□□□□□ -1.27
CMTM1-210ENST00000528441 TPPP2P59282 170 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 VMA21Q3ZAQ7 101 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 Q6ZPA2 131 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 PPP1R27Q86WC6 154 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 MRPL41Q8IXM3 137 aaKnown RBP7.13□□□□□ -1.27
CMTM1-210ENST00000528441 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.13□□□□□ -1.27
CMTM1-210ENST00000528441 BVESQ8NE79 360 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 ACOT12Q8WYK0 555 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 PTX4Q96A99 478 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 RITA1Q96K30 269 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 TSC22D3Q99576 134 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 CABLES2Q9BTV7 478 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 IFT46Q9NQC8 304 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 DIABLOQ9NR28 239 aa7.13□□□□□ -1.27
CMTM1-210ENST00000528441 AURKAIP1Q9NWT8 199 aaPredicted RBP7.13□□□□□ -1.27
CMTM1-210ENST00000528441 ZMAT5Q9UDW3 170 aaKnown RBP7.13□□□□□ -1.27
CMTM1-210ENST00000528441 MRPS7Q9Y2R9 242 aaKnown RBP7.13□□□□□ -1.27
CMTM1-210ENST00000528441 IGKV1-6A0A0C4DH72 117 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 DIRAS3O95661 229 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 CTXN2P0C2S0 81 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 RRASP10301 218 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 CD37P11049 281 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 NFYAP23511 347 aaPredicted RBP7.12□□□□□ -1.27
CMTM1-210ENST00000528441 DTYMKP23919 212 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 ACTBL2Q562R1 376 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 OR2B11Q5JQS5 317 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 HACD4Q5VWC8 232 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 ZNF660Q6AZW8 331 aaPredicted RBP7.12□□□□□ -1.27
CMTM1-210ENST00000528441 LINC00482Q8N8I6 264 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 ZNF383Q8NA42 475 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 NPBQ8NG41 125 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 OR11H1Q8NG94 326 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 CASTOR1Q8WTX7 329 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 C4orf3Q8WVX3 66 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 ARPC1AQ92747 370 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 ISOC1Q96CN7 298 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 ADTRPQ96IZ2 230 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 MS4A10Q96PG2 267 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 SDHAF2Q9NX18 166 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 ELF5Q9UKW6 265 aaPredicted RBP7.12□□□□□ -1.27
CMTM1-210ENST00000528441 FOXA2Q9Y261 457 aaPredicted RBP7.12□□□□□ -1.27
CMTM1-210ENST00000528441 VSIG4Q9Y279 399 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 KCNK7Q9Y2U2 307 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 PRELID3BQ9Y3B1 194 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 ETV7Q9Y603 341 aa7.12□□□□□ -1.27
CMTM1-210ENST00000528441 TRBV6-7A0A0A0MS04 114 aa7.11□□□□□ -1.27
CMTM1-210ENST00000528441 MEIS3P1A6NDR6 274 aa7.11□□□□□ -1.27
CMTM1-210ENST00000528441 SEC14L6B5MCN3 397 aa7.11□□□□□ -1.27
CMTM1-210ENST00000528441 FCGR3BO75015 233 aa7.11□□□□□ -1.27
CMTM1-210ENST00000528441 GABARAPO95166 117 aa7.11□□□□□ -1.27
CMTM1-210ENST00000528441 NDUFA3O95167 84 aa7.11□□□□□ -1.27
CMTM1-210ENST00000528441 SPDEFO95238 335 aa7.11□□□□□ -1.27
CMTM1-210ENST00000528441 CRYZL1O95825 349 aa7.11□□□□□ -1.27
CMTM1-210ENST00000528441 IGHV3-11P01762 117 aa7.11□□□□□ -1.27
CMTM1-210ENST00000528441 IGHG4P01861 327 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms