RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 SMDT1Q9H4I9 107 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 PRORYQ9H606 182 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 NARFLQ9H6Q4 476 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 KCNJ16Q9NPI9 418 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 C19orf12Q9NSK7 152 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 PLA2G2EQ9NZK7 142 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 RPUSD1Q9UJJ7 312 aaKnown RBP12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 USF3Q68DE3 2245 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 ICE1Q9Y2F5 2266 aa12.21□□□□□ -0.45
ECHDC1-220ENST00000528402 FRYQ5TBA9 3013 aa12.21□□□□□ -0.46
ECHDC1-220ENST00000528402 POLEQ07864 2286 aa12.21□□□□□ -0.46
ECHDC1-220ENST00000528402 MARCH11A6NNE9 402 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 TMPRSS2O15393 492 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 NDUFB3O43676 98 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 DAOP14920 347 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 NQO2P16083 231 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 NDUFB7P17568 137 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 ZNF134P52741 427 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 DVL1P1P54792 670 aaPredicted RBP12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 RAB2AP61019 212 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 TAGLNQ01995 201 aaKnown RBP12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 PEA15Q15121 130 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 C10orf91Q5T1B1 145 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 NCR3LG1Q68D85 454 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 FAM53AQ6NSI3 398 aaPredicted RBP12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 TMEM14EPQ6UXP3 125 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 FAM216BQ8N7L0 139 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 OR4S2Q8NH73 311 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 SUN5Q8TC36 379 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 R3HDM4Q96D70 268 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 PSMG3Q9BT73 122 aaPredicted RBP12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 SEC11CQ9BY50 192 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 RBKSQ9H477 322 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 TREM1Q9NP99 234 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 CISD1Q9NZ45 108 aaKnown RBP12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 PCNX1Q96RV3 2341 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 RAI1Q7Z5J4 1906 aaPredicted RBP12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 A0A1B0GW64 132 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 FAM90A27PA6NNH2 459 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 RNASEK-C17orf49H0YIS7 233 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 FCGR3BO75015 233 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 PROP1O75360 226 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 APOC3P02656 99 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 CD5P06127 495 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 MRPS11P82912 194 aaKnown RBP12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 IZUMO4Q1ZYL8 232 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 CT45A1Q5HYN5 189 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 SLC25A24Q6NUK1 477 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 ZNF295-AS1Q8N0V1 137 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 SVBPQ8N300 66 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 TMEM217Q8N7C4 229 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 C8orf31Q8N9H6 132 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 ZNF439Q8NDP4 499 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 CT45A3Q8NHU0 189 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 CA5BP1Q8WTZ4 195 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 CCL17Q92583 94 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 CLCC1Q96S66 551 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 PBDC1Q9BVG4 233 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 UQCC1Q9NVA1 299 aa12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 CARHSP1Q9Y2V2 147 aaKnown RBP12.2□□□□□ -0.46
ECHDC1-220ENST00000528402 IGHV1-69-2A0A0G2JMI3 117 aa12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 NXPH3O95157 252 aa12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 IAPPP10997 89 aa12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 SELLP14151 372 aa12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 SNCAP37840 140 aa12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 ID4P47928 161 aa12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 RPL31P62899 125 aaKnown RBP12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 SERF2P84101 59 aa12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 HFEQ30201 348 aa12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 PDLIM3Q53GG5 364 aaPredicted RBP12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 OR2B11Q5JQS5 317 aa12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 SPANXN5Q5MJ07 72 aa12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 AKR1C8PQ5T2L2 129 aa12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 SLC25A48Q6ZT89 311 aaKnown RBP12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 LINC01560Q8TB33 94 aa12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 DDB2Q92466 427 aa12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 PINX1Q96BK5 328 aaKnown RBP12.19□□□□□ -0.46
ECHDC1-220ENST00000528402 TMEM8BA6NDV4 472 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 HBE1P02100 147 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 PPOXP50336 477 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 SPCS3P61009 180 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 ADORA2A-AS1P86434 159 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 TLE4Q04727 773 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 ZNF616Q08AN1 781 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 LRRC75BQ2VPJ9 315 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 ZNF672Q499Z4 452 aaPredicted RBP12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 DHRS7BQ6IAN0 325 aaPredicted RBP12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 UNQ6494/PRO21346Q6UXR6 183 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 HEPN1Q6WQI6 88 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 TMEM182Q6ZP80 229 aaPredicted RBP12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 TCF23Q7RTU1 214 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 PUSL1Q8N0Z8 303 aaKnown RBP12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 LILRB2Q8N423 598 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 ZNF525Q8N782 197 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 OR4A16Q8NH70 328 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 DTD1Q8TEA8 209 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 ZCCHC14Q8WYQ9 949 aaKnown RBP12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 ZNF714Q96N38 554 aa12.18□□□□□ -0.46
ECHDC1-220ENST00000528402 TMEM204Q9BSN7 226 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms