RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 MRPL14Q6P1L8 145 aaKnown RBP12.35□□□□□ -0.43
CAPN1-214ENST00000528165 OR10G8Q8NGN5 311 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 OR10D3Q8NH80 312 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 APOBEC3DQ96AK3 386 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-214ENST00000528165 PCED1AQ9H1Q7 454 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 ZFP30Q9Y2G7 519 aa12.35□□□□□ -0.43
CAPN1-214ENST00000528165 A0A1W2PPV4 95 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 ZG16O60844 167 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 LHX2P50458 406 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 LINC00310P59036 64 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 C9orf135Q5VTT2 229 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 MRPL18Q9H0U6 180 aaKnown RBP12.34□□□□□ -0.43
CAPN1-214ENST00000528165 A0A096LPE4 126 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 IGHV1-45A0A0A0MS14 117 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 TRAV38-1A0A0B4J264 116 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 A0A1W2PPZ6 126 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 TCF21O43680 179 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 RAMP3O60896 148 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 HNF1AP20823 631 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 RAB7AP51149 207 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 C11orf42Q8N5U0 333 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 ABHD3Q8WU67 409 aa12.34□□□□□ -0.43
CAPN1-214ENST00000528165 CIB3Q96Q77 187 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-214ENST00000528165 LNP1A1A4G5 178 aa12.33□□□□□ -0.43
CAPN1-214ENST00000528165 ODAMA1E959 279 aa12.33□□□□□ -0.43
CAPN1-214ENST00000528165 RBMXL2O75526 392 aaKnown RBP12.33□□□□□ -0.43
CAPN1-214ENST00000528165 SRD5A2P31213 254 aa12.33□□□□□ -0.43
CAPN1-214ENST00000528165 ZNF816Q0VGE8 651 aaPredicted RBP12.33□□□□□ -0.43
CAPN1-214ENST00000528165 VWC2Q2TAL6 325 aa12.33□□□□□ -0.43
CAPN1-214ENST00000528165 ZDHHC16Q969W1 377 aa12.33□□□□□ -0.43
CAPN1-214ENST00000528165 DNAJC4Q9NNZ3 241 aa12.33□□□□□ -0.43
CAPN1-214ENST00000528165 SH2D2AQ9NP31 389 aa12.33□□□□□ -0.43
CAPN1-214ENST00000528165 WIPI2Q9Y4P8 454 aa12.33□□□□□ -0.43
CAPN1-214ENST00000528165 DIDO1Q9BTC0 2240 aaKnown RBP12.33□□□□□ -0.43
CAPN1-214ENST00000528165 ANKRD30BLA7E2S9 258 aa12.33□□□□□ -0.44
CAPN1-214ENST00000528165 C2CD4DB7Z1M9 353 aa12.33□□□□□ -0.44
CAPN1-214ENST00000528165 TIMP3P35625 211 aa12.33□□□□□ -0.44
CAPN1-214ENST00000528165 ARF1P84077 181 aaKnown RBP12.33□□□□□ -0.44
CAPN1-214ENST00000528165 GCSAMLQ5JQS6 135 aa12.33□□□□□ -0.44
CAPN1-214ENST00000528165 TRBV20OR9-2A0A075B6H5 130 aa12.33□□□□□ -0.44
CAPN1-214ENST00000528165 LOC102723996A0A087X1L8 192 aa12.33□□□□□ -0.44
CAPN1-214ENST00000528165 SIRPB1O00241 398 aa12.33□□□□□ -0.44
CAPN1-214ENST00000528165 TRAPPC6AO75865 159 aa12.33□□□□□ -0.44
CAPN1-214ENST00000528165 EPHA8P29322 1005 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-214ENST00000528165 CHRNB4P30926 498 aa12.33□□□□□ -0.44
CAPN1-214ENST00000528165 GNG3P63215 75 aa12.33□□□□□ -0.44
CAPN1-214ENST00000528165 NRN1LQ496H8 165 aa12.33□□□□□ -0.44
CAPN1-214ENST00000528165 RPS19BP1Q86WX3 136 aaKnown RBP12.33□□□□□ -0.44
CAPN1-214ENST00000528165 OR4B1Q8NGF8 309 aa12.33□□□□□ -0.44
CAPN1-214ENST00000528165 CCDC74BQ96LY2 380 aa12.33□□□□□ -0.44
CAPN1-214ENST00000528165 NGFP01138 241 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 CYC1P08574 325 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 THBS3P49746 956 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 SIGLECL1Q8N7X8 197 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 RAB1CQ92928 201 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 GMPPAQ96IJ6 420 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-214ENST00000528165 SLC35E1Q96K37 410 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 IMMP1LQ96LU5 166 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 CHODLQ9H9P2 273 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 BRWD1Q9NSI6 2320 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 OR5B21A6NL26 309 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 FCN1O00602 326 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 RHBDL1O75783 438 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 EDDM3BP56851 147 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 KRTDAPP60985 99 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 FBXO46Q6PJ61 603 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-214ENST00000528165 QTRT1Q9BXR0 403 aaKnown RBP12.32□□□□□ -0.44
CAPN1-214ENST00000528165 ASCL3Q9NQ33 180 aa12.32□□□□□ -0.44
CAPN1-214ENST00000528165 TRAV9-1A0A075B6T8 112 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 IGHV5-10-1A0A0J9YXX1 117 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 MRPL33O75394 65 aaKnown RBP12.31□□□□□ -0.44
CAPN1-214ENST00000528165 TMEM249Q2WGJ8 235 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 SPINK9Q5DT21 86 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 Q6P435 159 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 ZNF497Q6ZNH5 498 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 OCC1Q8TAD7 63 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 TXNDC17Q9BRA2 123 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 PRRG4Q9BZD6 226 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 PRDM6Q9NQX0 595 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 ZNF586Q9NXT0 402 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 IL36BQ9NZH7 164 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 A0A0G2JMM0 328 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 A0A1W2PPB8 328 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 A0A1W2PRS3 328 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 KIR3DP1A8MWS1 328 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 P0C879 139 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 COX6A1P12074 109 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 COMPP49747 757 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-214ENST00000528165 ZNF645Q8N7E2 425 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 OR1L6Q8NGR2 347 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 TMEM204Q9BSN7 226 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 FAM103A1Q9BTL3 118 aaKnown RBP12.31□□□□□ -0.44
CAPN1-214ENST00000528165 WDR54Q9H977 334 aa12.31□□□□□ -0.44
CAPN1-214ENST00000528165 TNRC6AQ8NDV7 1962 aaKnown RBP12.31□□□□□ -0.44
CAPN1-214ENST00000528165 TNRC6BQ9UPQ9 1833 aaKnown RBP12.3□□□□□ -0.44
CAPN1-214ENST00000528165 SCO2A0A1W2PP80 73 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 A0A1W2PQM1 296 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 S1PR2O95136 353 aa12.3□□□□□ -0.44
CAPN1-214ENST00000528165 P04436 131 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms