RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ZGRF1Q86YA3 2104 aa10.57□□□□□ -0.72
CAPN1-208ENST00000527323 LILRA1O75019 489 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 RBMXL2O75526 392 aaKnown RBP10.56□□□□□ -0.72
CAPN1-208ENST00000527323 KRASP01116 189 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 SNRPCP09234 159 aaKnown RBP10.56□□□□□ -0.72
CAPN1-208ENST00000527323 CA6P23280 308 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 CEACAM6P40199 344 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 GNG3P63215 75 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 DEFB109BQ30KR1 87 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 ZNF585BQ52M93 769 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 MRPL41Q8IXM3 137 aaKnown RBP10.56□□□□□ -0.72
CAPN1-208ENST00000527323 FAM169BQ8N8A8 192 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 OR10G9Q8NGN4 311 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 OR10G7Q8NGN6 311 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 GFRA3O60609 400 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 APLNRP35414 380 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 NBL1P41271 181 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 PMS2P11Q13670 270 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 SSPNQ14714 243 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 MAJINQ3KP22 176 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 OR5P3Q8WZ94 311 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 CHD3Q12873 2000 aaKnown RBP10.56□□□□□ -0.72
CAPN1-208ENST00000527323 ARHGAP21Q5T5U3 1957 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 ST8SIA5O15466 376 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 CYB561P49447 251 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 NHLH1Q02575 133 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 SPATA46Q5T0L3 261 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 OR2T10Q8NGZ9 312 aa10.56□□□□□ -0.72
CAPN1-208ENST00000527323 CACNA1BQ00975 2339 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 ZNF503-AS2A6NEH8 195 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 A8MWP6 167 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 KLK10O43240 276 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 ACSM6Q6P461 480 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 LINC00596Q86U02 117 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 ZNF709Q8N972 641 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 PTPRBP23467 1997 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 SPTBN1Q01082 2364 aaKnown RBP10.55□□□□□ -0.72
CAPN1-208ENST00000527323 B9A039 149 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 PAGE4O60829 102 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 SYNGR4O95473 234 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 CHRNA7P36544 502 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 ACSF3Q4G176 576 aaPredicted RBP10.55□□□□□ -0.72
CAPN1-208ENST00000527323 FFAR4Q5NUL3 377 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 CLN8Q9UBY8 286 aa10.55□□□□□ -0.72
CAPN1-208ENST00000527323 TRBV6-6A0A0A6YYG2 114 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 HRASP01112 189 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 IGLV2-14P01704 120 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 GYPAP02724 150 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 ZNF816Q0VGE8 651 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-208ENST00000527323 TGIF2LYQ8IUE0 185 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 DRAM1Q8N682 238 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 RNASEH2CQ8TDP1 164 aaKnown RBP10.54□□□□□ -0.72
CAPN1-208ENST00000527323 TMEM18Q96B42 140 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 NOL4LQ96MY1 436 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-208ENST00000527323 WFIKKN1Q96NZ8 548 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 AGMATQ9BSE5 352 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 DDA1Q9BW61 102 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 ACTR3CQ9C0K3 210 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-208ENST00000527323 ASCL3Q9NQ33 180 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 AURKAIP1Q9NWT8 199 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-208ENST00000527323 KIAA2026Q5HYC2 2103 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 MAP1AP78559 2803 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-208ENST00000527323 CTXND1A0A1B0GTU2 59 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 TMEM250H0YL14 139 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 MKRN2OSH3BPM6 223 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 SELLP14151 372 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 G6PCP35575 357 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 FAM3BP58499 235 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-208ENST00000527323 TNFRSF9Q07011 255 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 TGIF2LXQ8IUE1 241 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 ZNF808Q8N4W9 903 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-208ENST00000527323 PYGO2Q9BRQ0 406 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 WASF3Q9UPY6 502 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 GCGP01275 180 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 BMP5P22003 454 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 GTF3C1Q12789 2109 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 NRN1LQ496H8 165 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 ABHD17BQ5VST6 288 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 OR10P1Q8NGE3 313 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 TMEM45BQ96B21 275 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 ACY3Q96HD9 319 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 SCNM1Q9BWG6 230 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 DEFB127Q9H1M4 99 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 MPC1Q9Y5U8 109 aa10.54□□□□□ -0.72
CAPN1-208ENST00000527323 OR5B21A6NL26 309 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 COX5AP20674 150 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 ARR3P36575 388 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 MSMO1Q15800 293 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 FDCSPQ8NFU4 85 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 TMEM170AQ8WVE7 144 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 RAB24Q969Q5 203 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 APH1AQ96BI3 265 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 POM121L2Q96KW2 1035 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 C2orf88Q9BSF0 95 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 NDUFAF3Q9BU61 184 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 CACNA1DQ01668 2161 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 CADP27708 2225 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.53□□□□□ -0.72
CAPN1-208ENST00000527323 K7EM74 188 aa10.53□□□□□ -0.72
CAPN1-208ENST00000527323 TCAPO15273 167 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms