RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 GGTLC1Q9BX51 225 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 TM2D1Q9BX74 207 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 HCAR1Q9BXC0 346 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 SAMD10Q9BYL1 202 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 SMIM3Q9BZL3 60 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 COA1Q9GZY4 146 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 CST11Q9H112 138 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 UBTD1Q9HAC8 227 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 PNRC2Q9NPJ4 139 aaKnown RBP3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 GPR84Q9NQS5 396 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 CISD1Q9NZ45 108 aaKnown RBP3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 NUDT4Q9NZJ9 180 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 B4GALT7Q9UBV7 327 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 AK3Q9UIJ7 227 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 VSIG4Q9Y279 399 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 TRAPPC1Q9Y5R8 145 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 V9GY05 133 aa3.1□□□□□ -1.91
CLNS1A-209ENST00000527299 LCTP09848 1927 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 C13orf42A0A1B0GVH6 325 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 A0A1B0GX51 115 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 DUXBA0A1W2PPF3 345 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 C1orf226A1L170 272 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 C7orf71A4D174 169 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 TMEM8BA6NDV4 472 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 DPRXA6NFQ7 191 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 NPIPB5A8MRT5 1133 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 ANKRD66B4E2M5 251 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 F5H5K5 113 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 H0YJW9 148 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 TMEM250H0YL14 139 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 H3BMH7 237 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 H3BML4 177 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 J3KTA2 159 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 SLC31A1O15431 190 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 RS1O15537 224 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 PHF1O43189 567 aaPredicted RBP3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 SYNGR1O43759 233 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF217O75362 1048 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 FCN3O75636 299 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 SERF1AO75920 110 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 ETHE1O95571 254 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 CXCL10P02778 98 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 CATP04040 527 aaKnown RBP3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 GPX1P07203 203 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 C8orf88P0DMB2 117 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 CT45A10P0DMU9 189 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 IRF1P10914 325 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF708P17019 499 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF17P17021 662 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 ALOX5APP20292 161 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 EVI2AP22794 236 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 PRTN3P24158 256 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 EDNRAP25101 427 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 HTR1DP28221 377 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 NTSP30990 170 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 ADRA1AP35348 466 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 DRD3P35462 400 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF93P35789 620 aaPredicted RBP3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 TNFSF9P41273 254 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 CCR2P41597 374 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 LHX2P50458 406 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 STC1P52823 247 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 KRTDAPP60985 99 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 SUMO2P61956 95 aaKnown RBP3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 NTHL1P78549 312 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 GGTLC2Q14390 218 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 NUMA1Q14980 2115 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 IGFBP7Q16270 282 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 HLA-DRB5Q30154 266 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 ITPRIPL2Q3MIP1 535 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 KIAA1644Q3SXP7 199 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 ACSF3Q4G176 576 aaPredicted RBP3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 VAX1Q5SQQ9 334 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 UTF1Q5T230 341 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 TMEM215Q68D42 235 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 LCN15Q6UWW0 184 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 C17orf99Q6UX52 265 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 ERASQ7Z444 233 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 MDGA2Q7Z553 956 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 OR5H2Q8NGV7 314 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 OR2AJ1Q8NGZ0 328 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 OR8S1Q8NH09 359 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 OR10D3Q8NH80 312 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 FNDC9Q8TBE3 224 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 FAM213BQ8TBF2 198 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 C18orf32Q8TCD1 76 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 RPS4Y2Q8TD47 263 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 NEUROG1Q92886 237 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 EMG1Q92979 244 aaKnown RBP3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 NAT6Q93015 286 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 DERL3Q96Q80 235 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 GFI1Q99684 422 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 C16orf70Q9BSU1 422 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 VN1R3Q9BXE9 311 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 COMMD5Q9GZQ3 224 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 S1PR5Q9H228 398 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 FNDC4Q9H6D8 234 aaPredicted RBP3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 SPANXB1Q9NS25 103 aaPredicted RBP3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 CISHQ9NSE2 258 aa3.09□□□□□ -1.91
CLNS1A-209ENST00000527299 EHFQ9NZC4 300 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms