RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 S1PR3Q99500 378 aa10.31□□□□□ -0.76
SSSCA1-203ENST00000526877 PHB2Q99623 299 aa10.31□□□□□ -0.76
SSSCA1-203ENST00000526877 HSD17B10Q99714 261 aaKnown RBP10.31□□□□□ -0.76
SSSCA1-203ENST00000526877 IFI27L2Q9H2X8 130 aa10.31□□□□□ -0.76
SSSCA1-203ENST00000526877 ESM1Q9NQ30 184 aa10.31□□□□□ -0.76
SSSCA1-203ENST00000526877 SDHAF2Q9NX18 166 aa10.31□□□□□ -0.76
SSSCA1-203ENST00000526877 AUP1Q9Y679 476 aa10.31□□□□□ -0.76
SSSCA1-203ENST00000526877 HMX3A6NHT5 357 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 TOX4O94842 621 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 IGLV2-14P01704 120 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 COX7A1P24310 79 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 RRAS2P62070 204 aaPredicted RBP10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 SUPT4H1P63272 117 aaKnown RBP10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 SLC9A3R2Q15599 337 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 UTF1Q5T230 341 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 NCR3LG1Q68D85 454 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 VMO1Q7Z5L0 202 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 PNKDQ8N490 385 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 UXS1Q8NBZ7 420 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 BEND2Q8NDZ0 799 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 C22orf15Q8WYQ4 148 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 SIRPDQ9H106 197 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 UNKLQ9H9P5 680 aaKnown RBP10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 SIRT7Q9NRC8 400 aa10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 LIN7CQ9NUP9 197 aaKnown RBP10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 AMMECR1Q9Y4X0 333 aaPredicted RBP10.3□□□□□ -0.76
SSSCA1-203ENST00000526877 A0A0B4J2A0 478 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 PIGBOS1A0A0B4J2F0 54 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 H0Y980 276 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 M0R1X1 148 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 OR5AC1P0C628 307 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 F2RP25116 425 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 SRPXP78539 464 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 RPL39P5Q59GN2 51 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 TCTEX1D1Q8N7M0 179 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 OR11H6Q8NGC7 330 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 OR51H1Q8NH63 302 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 CHAC2Q8WUX2 184 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 MITD1Q8WV92 249 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 TCTEX1D2Q8WW35 142 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 ADTRPQ96IZ2 230 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 PCGF1Q9BSM1 259 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 SHPKQ9UHJ6 478 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 NUP50Q9UKX7 468 aa10.29□□□□□ -0.76
SSSCA1-203ENST00000526877 SAA2-SAA4A0A096LPE2 208 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 TMEM89A2RUT3 159 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 ARG1P05089 322 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 TRAPPC2P0DI81 140 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 TRAPPC2BP0DI82 140 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 SAA2P0DJI9 122 aaPredicted RBP10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 THBS3P49746 956 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 TMEM187Q14656 261 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 HLA-DRB5Q30154 266 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 SP6Q3SY56 376 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 FAM71F2Q6NXP2 309 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 LIAT1Q6ZQX7 453 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 ODF3L1Q8IXM7 274 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 BCL6BQ8N143 479 aaPredicted RBP10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 LGI3Q8N145 548 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 JMJD8Q96S16 334 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 TP53RKQ96S44 253 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 GPHA2Q96T91 129 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 TMEM222Q9H0R3 208 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 PRELID3BQ9Y3B1 194 aa10.28□□□□□ -0.76
SSSCA1-203ENST00000526877 TRIM77I1YAP6 450 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 PFDN1O60925 122 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 IGLV1-47P01700 117 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 SERPINE2P07093 398 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 MMP9P14780 707 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 DUTP33316 252 aaKnown RBP10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 CEACAM3P40198 252 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 KIR2DS2P43631 304 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 COMPP49747 757 aaPredicted RBP10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 ZNF137PP52743 207 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 DLX1P56177 255 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 EIF4EBP1Q13541 118 aaPredicted RBP10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 FCN2Q15485 313 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 ANKRD55Q3KP44 614 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 LIN54Q6MZP7 749 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 ZNF833PQ6ZTB9 187 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 CD300LFQ8TDQ1 290 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 GLYATL2Q8WU03 294 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 C5orf30Q96GV9 206 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 ZNF48Q96MX3 618 aaPredicted RBP10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 TBX15Q96SF7 602 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 ZNF251Q9BRH9 671 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 FAM212BQ9NTI7 297 aaPredicted RBP10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 ZNRD1Q9P1U0 126 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 MGAT4CQ9UBM8 478 aa10.27□□□□□ -0.77
SSSCA1-203ENST00000526877 ANK2Q01484 3957 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 LEUTXA8MZ59 168 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 RNASEK-C17orf49H0YIS7 233 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 BUB1B-PAK6H3BSN5 160 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 PROP1O75360 226 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 GAPDHP04406 335 aaKnown RBP10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 SULT1A3P0DMM9 295 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 SULT1A4P0DMN0 295 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 IGHV4-38-2P0DP08 117 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 RPA2P15927 270 aa10.26□□□□□ -0.77
SSSCA1-203ENST00000526877 UCP1P25874 307 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms