RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 MMABQ96EY8 250 aaPredicted RBP4.27□□□□□ -1.73
CD44-218ENST00000525469 AP1S3Q96PC3 154 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 TSPAN32Q96QS1 320 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 SIGMAR1Q99720 223 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 NRTNQ99748 197 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 PMCHL2Q9BQD1 86 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 TXNDC17Q9BRA2 123 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 EBPLQ9BY08 206 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 VCX2Q9H322 139 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 OR51I2Q9H344 312 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 SDF2L1Q9HCN8 221 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 ELOVL5Q9NYP7 299 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 OR6C3Q9NZP0 311 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 FBXL17Q9UF56 701 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 CRLS1Q9UJA2 301 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 RAB22AQ9UL26 194 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 RNF24Q9Y225 148 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 FUT9Q9Y231 359 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 MED31Q9Y3C7 131 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 WDR45Q9Y484 360 aa4.27□□□□□ -1.73
CD44-218ENST00000525469 NUP214P35658 2090 aaPredicted RBP4.26□□□□□ -1.73
CD44-218ENST00000525469 LOC105371242A0A075B767 164 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 TRBV5-7A0A0A0MS05 114 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 IGHV3-20A0A0C4DH32 117 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 A6NDN8 102 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 ZNF732B4DXR9 585 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 C9JQL5 133 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 G3V4G9 280 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 K7N7A8 449 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 HMGN4O00479 90 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 MPPED1O15442 326 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 RHBDL1O75783 438 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 TXNDC12O95881 172 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 SLPIP03973 132 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 CLEC3BP05452 202 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 IFI6P09912 130 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 ERGP11308 486 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 ZNF43P17038 809 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 AKR1C4P17516 323 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 ADRA2CP18825 462 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 F2RP25116 425 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 BSGP35613 385 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 GALR1P47211 349 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 ATP5J2P56134 94 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 S100A10P60903 97 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 ERVS71-1P61550 626 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 RND3P61587 244 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 RPS16P62249 146 aaKnown RBP4.26□□□□□ -1.73
CD44-218ENST00000525469 DUSP2Q05923 314 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 KRTAP1-1Q07627 177 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 IL15RAQ13261 267 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 CRMP1Q14194 572 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 INSL4Q14641 139 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 ADIRFQ15847 76 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 CLEC12BQ2HXU8 276 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 FBXL19-AS1Q494R0 122 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 PSMG4Q5JS54 123 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 KHDC1LQ5JSQ8 128 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 CLEC12AQ5QGZ9 265 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 FAM27D1Q5T7N8 215 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 AADACL3Q5VUY0 350 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 RAET1LQ5VY80 246 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 FAAP20Q6NZ36 180 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 TMPPEQ6ZT21 453 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 MOB1BQ7L9L4 216 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 SERPINA9Q86WD7 417 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 RPS19BP1Q86WX3 136 aaKnown RBP4.26□□□□□ -1.73
CD44-218ENST00000525469 C1orf174Q8IYL3 243 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 LILRA3Q8N6C8 439 aaPredicted RBP4.26□□□□□ -1.73
CD44-218ENST00000525469 SIGLECL1Q8N7X8 197 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 Q8NFD4 153 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 OR52R1Q8NGF1 315 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 FAM213BQ8TBF2 198 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 ZNF596Q8TC21 504 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 RNF128Q8TEB7 428 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 DOK4Q8TEW6 326 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 SLC25A43Q8WUT9 341 aaPredicted RBP4.26□□□□□ -1.73
CD44-218ENST00000525469 TMEM171Q8WVE6 324 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 TMEM186Q96B77 213 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 RNF125Q96EQ8 232 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 LINC00615Q96LM1 132 aaPredicted RBP4.26□□□□□ -1.73
CD44-218ENST00000525469 ALG12Q9BV10 488 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 HCAR1Q9BXC0 346 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 MMP25Q9NPA2 562 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 TUBG2Q9NRH3 451 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 AK3Q9UIJ7 227 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 GPR132Q9UNW8 380 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 TBL2Q9Y4P3 447 aaKnown RBP4.26□□□□□ -1.73
CD44-218ENST00000525469 LRP12Q9Y561 859 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 FAM215AQ9Y5M1 114 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 SIRT4Q9Y6E7 314 aaPredicted RBP4.26□□□□□ -1.73
CD44-218ENST00000525469 URGCP-MRPS24S4R325 110 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 ROS1P08922 2347 aa4.26□□□□□ -1.73
CD44-218ENST00000525469 IGHV2-26A0A0B4J1V2 119 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 A0A0G2JN53 185 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 LOC102723971A0A1B0GUV8 181 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 GAGE12BA1L429 117 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 OR4C45A6NMZ5 311 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 ZNF727A8MUV8 499 aa4.25□□□□□ -1.73
CD44-218ENST00000525469 ARPC3O15145 178 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms