RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 CEBPZOSA8MTT3 80 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 E9PLN8 166 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 SDCBPO00560 298 aaPredicted RBP7.03□□□□□ -1.28
HMGB4-204ENST00000522796 CDC42EP2O14613 210 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 GYPAP02724 150 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 CXCL8P10145 99 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 EGR1P18146 543 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 GPR183P32249 361 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 CA7P43166 264 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 RPS16P62249 146 aaKnown RBP7.03□□□□□ -1.28
HMGB4-204ENST00000522796 EWSR1Q01844 656 aaKnown RBP eCLIP7.03□□□□□ -1.28
HMGB4-204ENST00000522796 MFGE8Q08431 387 aaPredicted RBP7.03□□□□□ -1.28
HMGB4-204ENST00000522796 PSG7Q13046 419 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 RUNX3Q13761 415 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 LIAT1Q6ZQX7 453 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 ADGRE4PQ86SQ3 457 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 AMELYQ99218 206 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 TMEM133Q9H2Q1 129 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 ZNF665Q9H7R5 613 aa7.03□□□□□ -1.28
HMGB4-204ENST00000522796 HMGN4O00479 90 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 FCN3O75636 299 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 C8orf88P0DMB2 117 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 CT45A6P0DMU7 189 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 CT45A5P0DMU8 189 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 CT45A7P0DMV0 189 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 HIST1H1DP16402 221 aaKnown RBP7.02□□□□□ -1.29
HMGB4-204ENST00000522796 PNPLA4P41247 253 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 TAF10Q12962 218 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 CT45A1Q5HYN5 189 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 CHRDL2Q6WN34 429 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 SHISA6Q6ZSJ9 500 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 GVQW1Q8N7I0 195 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 CT45A3Q8NHU0 189 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 RNF138Q8WVD3 245 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 MBD3L1Q8WWY6 194 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 DDB2Q92466 427 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 PMCHL2Q9BQD1 86 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 ATG10Q9H0Y0 220 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 OR2D2Q9H210 308 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 GNB4Q9HAV0 340 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 ELOVL3Q9HB03 270 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 ZNF257Q9Y2Q1 563 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 MGAMO43451 1857 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 TRBV9A0A0B4J1U6 114 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 LOC102725191A0A1B0GVB3 256 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 DNPH1O43598 174 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 MT-CO3P00414 261 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 HTR1DP28221 377 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 SRIP30626 198 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 DCAF12Q5T6F0 453 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 ZFAND6Q6FIF0 208 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 LCN12Q6JVE5 192 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 DUX4L9Q6RFH8 374 aaPredicted RBP7.02□□□□□ -1.29
HMGB4-204ENST00000522796 Q6ZUT4 128 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 HAPLN4Q86UW8 402 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 ZNF683Q8IZ20 524 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 LRRC25Q8N386 305 aaPredicted RBP7.02□□□□□ -1.29
HMGB4-204ENST00000522796 OR51A4Q8NGJ6 313 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 C8orf46Q8TAG6 207 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 ZNRF4Q8WWF5 429 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 BAALCQ8WXS3 180 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 TMEM54Q969K7 222 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 NUDT22Q9BRQ3 303 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 VN1R3Q9BXE9 311 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 HES4Q9HCC6 221 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 SIGLEC8Q9NYZ4 499 aa7.02□□□□□ -1.29
HMGB4-204ENST00000522796 TNRC6AQ8NDV7 1962 aaKnown RBP7.02□□□□□ -1.29
HMGB4-204ENST00000522796 TNS1Q9HBL0 1735 aaKnown RBP7.02□□□□□ -1.29
HMGB4-204ENST00000522796 KIF26AQ9ULI4 1882 aaPredicted RBP7.01□□□□□ -1.29
HMGB4-204ENST00000522796 TINCRA0A1B0GVN0 87 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 SOCS1O15524 211 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 OR7C1O76099 320 aaPredicted RBP7.01□□□□□ -1.29
HMGB4-204ENST00000522796 MT-ATP8P03928 68 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 DRD3P35462 400 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 ZNF324BQ6AW86 544 aaPredicted RBP7.01□□□□□ -1.29
HMGB4-204ENST00000522796 ZNF547Q8IVP9 402 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 GCSAMQ8N6F7 178 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 OR52E2Q8NGJ4 325 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 Q8TCH9 128 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 MRPL24Q96A35 216 aaKnown RBP7.01□□□□□ -1.29
HMGB4-204ENST00000522796 RNF166Q96A37 237 aaPredicted RBP7.01□□□□□ -1.29
HMGB4-204ENST00000522796 CDIP1Q9H305 208 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 INSL5Q9Y5Q6 135 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 SELENOKQ9Y6D0 94 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 ZNF831Q5JPB2 1677 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 FAM90A27PA6NNH2 459 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 MPIG6BO95866 241 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 MOSP00540 346 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 PPIFP30405 207 aaKnown RBP7.01□□□□□ -1.29
HMGB4-204ENST00000522796 PRDX2P32119 198 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 C3AR1Q16581 482 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 ASTLQ6HA08 431 aaPredicted RBP7.01□□□□□ -1.29
HMGB4-204ENST00000522796 HFE2Q6ZVN8 426 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 OR8B3Q8NGG8 313 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 OR8B2Q96RD0 313 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 BCL2L10Q9HD36 194 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 SCRT2Q9NQ03 307 aa7.01□□□□□ -1.29
HMGB4-204ENST00000522796 A0A087X0K7 114 aa7□□□□□ -1.29
HMGB4-204ENST00000522796 RER1O15258 196 aa7□□□□□ -1.29
HMGB4-204ENST00000522796 HLA-DQA2P01906 255 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms