RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 VMA21Q3ZAQ7 101 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 WDR25Q64LD2 544 aaPredicted RBP10.01□□□□□ -0.81
SYNPO-204ENST00000519664 LYZL4Q96KX0 146 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 DEPPQ9NTK1 212 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 GBF1Q92538 1859 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 IGLV3-12A0A075B6K2 115 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 A0A0A6YYD4 124 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 EGR1P18146 543 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 SSTR5P35346 364 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 GNG4P50150 75 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 RAB7AP51149 207 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 BPIFB3P59826 476 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 OR5D13Q8NGL4 314 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 TMEM56Q96MV1 263 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 WIPI2Q9Y4P8 454 aa10.01□□□□□ -0.81
SYNPO-204ENST00000519664 hCG_38984A0A1B0GV85 526 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 K7ESF4 209 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 IGHV3-48P01763 117 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 ZNF735P0CB33 412 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 MRGPRGQ86SM5 289 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 ZNF441Q8N8Z8 693 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 ITLN1Q8WWA0 313 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 RNF126Q9BV68 326 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 GLRX2Q9NS18 164 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 RNF7Q9UBF6 113 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 NAT8Q9UHE5 227 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 CA11O75493 328 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 KLF7O75840 302 aaPredicted RBP10□□□□□ -0.81
SYNPO-204ENST00000519664 SRSF3P84103 164 aaKnown RBP10□□□□□ -0.81
SYNPO-204ENST00000519664 FHL1Q13642 323 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 FDCSPQ8NFU4 85 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 TRAV34A0A0B4J273 112 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 H0Y980 276 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 K7EQM0 130 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 FAM157CP0CG43 387 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 UBE2L3P68036 154 aaKnown RBP10□□□□□ -0.81
SYNPO-204ENST00000519664 ATP6V1FQ16864 119 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 GTF2H5Q6ZYL4 71 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 HARBI1Q96MB7 349 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 PIEZO2Q9H5I5 2752 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 ZG16O60844 167 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 PITX3O75364 302 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 TFF1P04155 84 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 SLC25A5P05141 298 aaKnown RBP10□□□□□ -0.81
SYNPO-204ENST00000519664 ADH4P08319 380 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 RPL31P62899 125 aaKnown RBP10□□□□□ -0.81
SYNPO-204ENST00000519664 TNXAQ16473 311 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 FAM201AQ5SY85 155 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 C11orf42Q8N5U0 333 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 TCTEX1D1Q8N7M0 179 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 ZNRF1Q8ND25 227 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 PRDM14Q9GZV8 571 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 SH2D2AQ9NP31 389 aa10□□□□□ -0.81
SYNPO-204ENST00000519664 PRR19A6NJB7 356 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 NPY1RP25929 384 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 CD82P27701 267 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 GPX4P36969 197 aaPredicted RBP9.99□□□□□ -0.81
SYNPO-204ENST00000519664 PAX5Q02548 391 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 S100A7AQ86SG5 101 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 FGF11Q92914 225 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 DCTN5Q9BTE1 182 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 MYOZ1Q9NP98 299 aaPredicted RBP9.99□□□□□ -0.81
SYNPO-204ENST00000519664 TRAV38-1A0A0B4J264 116 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 J3QR89 54 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 CLPSP04118 112 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 BCL2P10415 239 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 FOLR2P14207 255 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 MPV17P39210 176 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 TMEM105Q8N8V8 129 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 GTF3AQ92664 365 aaKnown RBP9.99□□□□□ -0.81
SYNPO-204ENST00000519664 CLDN16Q9Y5I7 305 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 J3QR06 171 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 CELA3BP08861 270 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 FAM3BP58499 235 aaPredicted RBP9.99□□□□□ -0.81
SYNPO-204ENST00000519664 MRPL54Q6P161 138 aaKnown RBP9.99□□□□□ -0.81
SYNPO-204ENST00000519664 ZNF343Q6P1L6 599 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 FADS6Q8N9I5 356 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 SRD5A3Q9H8P0 318 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 BARX1Q9HBU1 254 aaPredicted RBP9.99□□□□□ -0.81
SYNPO-204ENST00000519664 RPRMQ9NS64 109 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 ZGRF1Q86YA3 2104 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 IGSF23A1L1A6 192 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 S1PR2O95136 353 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 PLAUP00749 431 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 SP9P0CG40 484 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 CD1BP29016 333 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 WNT5AP41221 380 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 OR1L4Q8NGR5 311 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 GAL3ST2Q9H3Q3 398 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 ZNF703Q9H7S9 590 aaPredicted RBP9.99□□□□□ -0.81
SYNPO-204ENST00000519664 TUBA4BQ9H853 241 aa9.99□□□□□ -0.81
SYNPO-204ENST00000519664 NDUFB4O95168 129 aa9.98□□□□□ -0.81
SYNPO-204ENST00000519664 KHDC3LQ587J8 217 aa9.98□□□□□ -0.81
SYNPO-204ENST00000519664 DRAM1Q8N682 238 aa9.98□□□□□ -0.81
SYNPO-204ENST00000519664 ATG101Q9BSB4 218 aa9.98□□□□□ -0.81
SYNPO-204ENST00000519664 TUBD1Q9UJT1 453 aa9.98□□□□□ -0.81
SYNPO-204ENST00000519664 SLC45A2Q9UMX9 530 aa9.98□□□□□ -0.81
SYNPO-204ENST00000519664 DUXBA0A1W2PPF3 345 aa9.98□□□□□ -0.81
SYNPO-204ENST00000519664 K7ERU9 68 aa9.98□□□□□ -0.81
SYNPO-204ENST00000519664 CSN1S1P47710 185 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms