RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 CCDC68Q9H2F9 335 aa-3.04□□□□□ -2.9
SNORA40.16-201ENST00000517238 RBM12B-AS1Q9P1G2 102 aa-3.04□□□□□ -2.9
SNORA40.16-201ENST00000517238 LIPT1Q9Y234 373 aa-3.04□□□□□ -2.9
SNORA40.16-201ENST00000517238 DDX49Q9Y6V7 483 aaKnown RBP-3.04□□□□□ -2.9
SNORA40.16-201ENST00000517238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-3.04□□□□□ -2.9
SNORA40.16-201ENST00000517238 C5orf42Q9H799 3197 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 F5H768 121 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 GOLGA8SH3BPF8 625 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 SPINK4O60575 86 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 UPK1BO75841 260 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 TCL1BO95988 128 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 MBP02144 154 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 SERPINE2P07093 398 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 MCF2P10911 925 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 MIFP14174 115 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 AKR1C4P17516 323 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 RAB4AP20338 218 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 F8A1P23610 371 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 IFNA8P32881 189 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 CCNHP51946 323 aaPredicted RBP-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 FXYD7P58549 80 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 DEFB1P60022 68 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 AP1S1P61966 158 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 DYNC1I2Q13409 638 aaKnown RBP-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 RNASE10Q5GAN6 216 aaKnown RBP-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 FAM180BQ6P0A1 224 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 METTL23Q86XA0 190 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 MFSD9Q8NBP5 474 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 SDR9C7Q8NEX9 313 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 C22orf15Q8WYQ4 148 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 EEF2KMTQ96G04 330 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 LINC00052Q96N35 136 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 LINC01587Q99440 93 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 ARPC5LQ9BPX5 153 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 MMADHCQ9H3L0 296 aaPredicted RBP-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 POMKQ9H5K3 350 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 WDR55Q9H6Y2 383 aaPredicted RBP-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 COQ10BQ9H8M1 238 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 FGF20Q9NP95 211 aaPredicted RBP-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 TUBG2Q9NRH3 451 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 SLC35D1Q9NTN3 355 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 CLN6Q9NWW5 311 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 NMRK1Q9NWW6 199 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 HHLA2Q9UM44 414 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 BOKQ9UMX3 212 aaPredicted RBP-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 PIGLQ9Y2B2 252 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 TBL2Q9Y4P3 447 aaKnown RBP-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 ORC6Q9Y5N6 252 aa-3.05□□□□□ -2.9
SNORA40.16-201ENST00000517238 TVP23AA6NH52 213 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 M0R3G1 203 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 NME4O00746 187 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 NDUFB2O95178 105 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 MSNP26038 577 aaKnown RBP-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 SELENBP1Q13228 472 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 MAPK14Q16539 360 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 SPANXN5Q5MJ07 72 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 LCN15Q6UWW0 184 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 TAF8Q7Z7C8 310 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 BCORP1Q8N888 145 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 ECHDC3Q96DC8 303 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 ELOVL3Q9HB03 270 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 KIF13BQ9NQT8 1826 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 PAQR5Q9NXK6 330 aaPredicted RBP-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 CLEC2DQ9UHP7 191 aa-3.06□□□□□ -2.9
SNORA40.16-201ENST00000517238 MYO9AB2RTY4 2548 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 FAM186AA6NE01 2351 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 C10orf71Q711Q0 1435 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 INSRP06213 1382 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 A0A0U1RQV5 110 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 ZNF815PA8K554 130 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 NCF1CA8MVU1 366 aaPredicted RBP-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 J3QT63 122 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 SULT1B1O43704 296 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 CLDN9O95484 217 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 FBP1P09467 338 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 NCF1P14598 390 aaPredicted RBP-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 GABRG2P18507 467 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 IL11P20809 199 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 RCVRNP35243 200 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 STC1P52823 247 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 STX1BP61266 288 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 XIAPP98170 497 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 ANGPT1Q15389 498 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 DEFB113Q30KQ7 82 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 EBLN2Q6P2I7 272 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 CERS6Q6ZMG9 384 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 C4orf50Q6ZRC1 276 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 RBM43Q6ZSC3 357 aaKnown RBP-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 SSBP3-AS1Q7Z2R9 100 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 SYCP3Q8IZU3 236 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 SLC7A5P1Q8MH63 180 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 OR13C8Q8NGS7 320 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 ASZ1Q8WWH4 475 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 AGMATQ9BSE5 352 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 TMEM147Q9BVK8 224 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 FXYD6Q9H0Q3 95 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 POMPQ9Y244 141 aa-3.07□□□□□ -2.9
SNORA40.16-201ENST00000517238 CECR2Q9BXF3 1484 aa-3.08□□□□□ -2.9
SNORA40.16-201ENST00000517238 PHLPP2Q6ZVD8 1323 aa-3.08□□□□□ -2.9
SNORA40.16-201ENST00000517238 LINC00862A6NCI5 91 aa-3.08□□□□□ -2.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms