RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	ZNF383	Q8NA42	475 aa		7.77	□□□□□ -1.17
CLDND1-231	ENST00000515620	OR1L6	Q8NGR2	347 aa		7.77	□□□□□ -1.17
CLDND1-231	ENST00000515620	GPR148	Q8TDV2	347 aa		7.77	□□□□□ -1.17
CLDND1-231	ENST00000515620	LGALS12	Q96DT0	336 aa		7.77	□□□□□ -1.17
CLDND1-231	ENST00000515620	SULT4A1	Q9BR01	284 aa		7.77	□□□□□ -1.17
CLDND1-231	ENST00000515620	GABARAPL3	Q9BY60	117 aa		7.77	□□□□□ -1.17
CLDND1-231	ENST00000515620	MFF	Q9GZY8	342 aa		7.77	□□□□□ -1.17
CLDND1-231	ENST00000515620	GABARAPL1	Q9H0R8	117 aa		7.77	□□□□□ -1.17
CLDND1-231	ENST00000515620	LRRC42	Q9Y546	428 aa		7.77	□□□□□ -1.17
CLDND1-231	ENST00000515620	TMEM213	A2RRL7	107 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	FAM90A7P	A6NKC0	464 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	LGALS9	O00182	355 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	MPPED1	O15442	326 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	GGCT	O75223	188 aa	Known RBP	7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	PDCD6	O75340	191 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	CRTAP	O75718	401 aa	Predicted RBP	7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	GLA	P06280	429 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	FCGR2B	P31994	310 aa	Predicted RBP	7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	GBX2	P52951	348 aa	Predicted RBP	7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	MRPL28	Q13084	256 aa	Known RBP	7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	AWAT2	Q6E213	333 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	ZNF575	Q86XF7	245 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	JAGN1	Q8N5M9	183 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	GVQW1	Q8N7I0	195 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	C11orf45	Q8TAV5	145 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620		Q96M66	194 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	OR14A2	Q96R54	314 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	MYCBP	Q99417	103 aa	Predicted RBP	7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	AGMAT	Q9BSE5	352 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	UBQLN2	Q9UHD9	624 aa		7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	EXOG	Q9Y2C4	368 aa	Known RBP	7.76	□□□□□ -1.17
CLDND1-231	ENST00000515620	KIR2DL5B	A0A0G2JN68	375 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	KIR2DL5B	A0A0G2JPC4	375 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	ZNF320	A2RRD8	509 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	IGLL5	B9A064	214 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	PROP1	O75360	226 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	CRYGB	P07316	175 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	RPL35A	P18077	110 aa	Known RBP	7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	CALB2	P22676	271 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	TCTA	P57738	103 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	ATP6AP1	Q15904	470 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	TNXA	Q16473	311 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	C15orf32	Q32M92	178 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	SLC25A30	Q5SVS4	291 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	XAF1	Q6GPH4	301 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	KIR2DL5A	Q8N109	375 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	SVOP	Q8N4V2	548 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	UXS1	Q8NBZ7	420 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	KIR2DL5B	Q8NHK3	375 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	SETD6	Q8TBK2	473 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	HARBI1	Q96MB7	349 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	C11orf54	Q9H0W9	315 aa	Predicted RBP	7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	SLC35D1	Q9NTN3	355 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	ZNF446	Q9NWS9	450 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	ERVK13-1	Q9NX77	482 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	OR1A1	Q9P1Q5	309 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	FBXL7	Q9UJT9	491 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	APLN	Q9ULZ1	77 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	DMRT1	Q9Y5R6	373 aa		7.75	□□□□□ -1.17
CLDND1-231	ENST00000515620	TRAV8-7	A0A075B6U6	113 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	TRBV9	A0A0B4J1U6	114 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620		A8MWP6	167 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620		M0R1X1	148 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	RTL8C	O15255	209 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	OR2J3	O76001	311 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	T-ENOL	P0DO92	83 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	IGFBP3	P17936	291 aa	Predicted RBP	7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	CAPG	P40121	348 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	RBPMS2	Q6ZRY4	209 aa	Known RBP	7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	NECAP1	Q8NC96	275 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	OR13C5	Q8NGS8	318 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	EDARADD	Q8WWZ3	215 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	SRSF12	Q8WXF0	261 aa	Known RBP	7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	CHMP1A	Q9HD42	196 aa	Predicted RBP	7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	AASS	Q9UDR5	926 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	ZNF221	Q9UK13	617 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	EXOSC1	Q9Y3B2	195 aa	Known RBP	7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	FAT2	Q9NYQ8	4349 aa		7.74	□□□□□ -1.17
CLDND1-231	ENST00000515620	ITGB1BP1	O14713	200 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	S1PR2	O95136	353 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	IGHV3-23	P01764	117 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	ARL3	P36405	182 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	CEACAM6	P40199	344 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	MAP2K4	P45985	399 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	SNRPG	P62308	76 aa	Known RBP	7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	MED22	Q15528	200 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	MRGPRG-AS1	Q2M3A8	158 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	FAM209B	Q5JX69	171 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	MEDAG	Q5VYS4	303 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	AMIGO2	Q86SJ2	522 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	GPHB5	Q86YW7	130 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	SLC38A6	Q8IZM9	456 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	OR2C3	Q8N628	320 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	TRUB1	Q8WWH5	349 aa	Known RBP	7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	ACOT12	Q8WYK0	555 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	NEDD4L	Q96PU5	975 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	FAAP24	Q9BTP7	215 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	C11orf68	Q9H3H3	251 aa	Known RBP	7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620	CKLF	Q9UBR5	152 aa		7.73	□□□□□ -1.17
CLDND1-231	ENST00000515620		S4R3C0	116 aa		7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms