RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 C8orf46Q8TAG6 207 aa10.52□□□□□ -0.73
PVT1-203ENST00000513868 NEIL1Q96FI4 390 aaPredicted RBP10.52□□□□□ -0.73
PVT1-203ENST00000513868 SPOCK3Q9BQ16 436 aa10.52□□□□□ -0.73
PVT1-203ENST00000513868 CACNG5Q9UF02 275 aa10.52□□□□□ -0.73
PVT1-203ENST00000513868 NSG2Q9Y328 171 aa10.52□□□□□ -0.73
PVT1-203ENST00000513868 MMP24Q9Y5R2 645 aa10.52□□□□□ -0.73
PVT1-203ENST00000513868 A0A087X0M5 115 aa10.51□□□□□ -0.73
PVT1-203ENST00000513868 A0A1B0GX30 115 aa10.51□□□□□ -0.73
PVT1-203ENST00000513868 ATP6V1G1O75348 118 aa10.51□□□□□ -0.73
PVT1-203ENST00000513868 IFNA7P01567 189 aa10.51□□□□□ -0.73
PVT1-203ENST00000513868 RPL12P30050 165 aaKnown RBP10.51□□□□□ -0.73
PVT1-203ENST00000513868 G6PCP35575 357 aa10.51□□□□□ -0.73
PVT1-203ENST00000513868 HTR2BP41595 481 aa10.51□□□□□ -0.73
PVT1-203ENST00000513868 EFNA4P52798 201 aa10.51□□□□□ -0.73
PVT1-203ENST00000513868 TLE4Q04727 773 aa10.51□□□□□ -0.73
PVT1-203ENST00000513868 LYG1Q8N1E2 194 aa10.51□□□□□ -0.73
PVT1-203ENST00000513868 ZNF596Q8TC21 504 aa10.51□□□□□ -0.73
PVT1-203ENST00000513868 TIMD4Q96H15 378 aa10.51□□□□□ -0.73
PVT1-203ENST00000513868 ARPC5LQ9BPX5 153 aa10.51□□□□□ -0.73
PVT1-203ENST00000513868 MAGT1Q9H0U3 335 aa10.51□□□□□ -0.73
PVT1-203ENST00000513868 F5H0A9 414 aaPredicted RBP10.5□□□□□ -0.73
PVT1-203ENST00000513868 RBFOX2O43251 390 aaKnown RBP eCLIP10.5□□□□□ -0.732e-12■■■■□ 22
PVT1-203ENST00000513868 NXPH3O95157 252 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 SPDEFO95238 335 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 TMEM50AO95807 157 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 KRASP01116 189 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 IGHV1-8P0DP01 117 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 NUP62P37198 522 aaPredicted RBP10.5□□□□□ -0.73
PVT1-203ENST00000513868 P2RY1P47900 373 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 MIDNQ504T8 468 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 ZNF295-AS1Q8N0V1 137 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 C8orf31Q8N9H6 132 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 OR8B3Q8NGG8 313 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 CD300LFQ8TDQ1 290 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 ST8SIA2Q92186 375 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 OR8B2Q96RD0 313 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 PLEKHA2Q9HB19 425 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 COA4Q9NYJ1 87 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 UBQLN2Q9UHD9 624 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 RPS10-NUDT3A0A1W2PQS6 291 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 FCGR3BO75015 233 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 PAX9P55771 341 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 NDUFA5Q16718 116 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 ZNF833PQ6ZTB9 187 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 LINC00311Q8N616 119 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 ZNF383Q8NA42 475 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 LY6G5BQ8NDX9 201 aa10.5□□□□□ -0.73
PVT1-203ENST00000513868 RNASE11Q8TAA1 199 aaKnown RBP10.5□□□□□ -0.73
PVT1-203ENST00000513868 BSCL2Q96G97 398 aaPredicted RBP10.5□□□□□ -0.73
PVT1-203ENST00000513868 PATZ1Q9HBE1 687 aaKnown RBP10.5□□□□□ -0.73
PVT1-203ENST00000513868 FAM208BQ5VWN6 2430 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 J3QR06 171 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 CHST1O43916 411 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 SSSCA1O60232 199 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 HPRT1P00492 218 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 CT45A6P0DMU7 189 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 CT45A5P0DMU8 189 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 CT45A7P0DMV0 189 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 MMP9P14780 707 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 UBA52P62987 128 aaKnown RBP10.49□□□□□ -0.73
PVT1-203ENST00000513868 GPR157Q5UAW9 335 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 ALKAL2Q6UX46 152 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 CLEC9AQ6UXN8 241 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 OR8H3Q8N146 312 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 STOML3Q8TAV4 291 aa10.49□□□□□ -0.73
PVT1-203ENST00000513868 ZNF471Q9BX82 626 aaPredicted RBP10.49□□□□□ -0.73
PVT1-203ENST00000513868 PPIAL4CA0A0B4J2A2 164 aa10.48□□□□□ -0.73
PVT1-203ENST00000513868 MARCH11A6NNE9 402 aa10.48□□□□□ -0.73
PVT1-203ENST00000513868 C22orf46C9J442 243 aa10.48□□□□□ -0.73
PVT1-203ENST00000513868 GPR137BO60478 399 aa10.48□□□□□ -0.73
PVT1-203ENST00000513868 PPIAL4GP0DN37 164 aa10.48□□□□□ -0.73
PVT1-203ENST00000513868 THBS3P49746 956 aa10.48□□□□□ -0.73
PVT1-203ENST00000513868 OR2C3Q8N628 320 aa10.48□□□□□ -0.73
PVT1-203ENST00000513868 SCARB1Q8WTV0 552 aa10.48□□□□□ -0.73
PVT1-203ENST00000513868 ST6GALNAC6Q969X2 333 aa10.48□□□□□ -0.73
PVT1-203ENST00000513868 R3HDM4Q96D70 268 aa10.48□□□□□ -0.73
PVT1-203ENST00000513868 RBMXL1Q96E39 390 aaKnown RBP10.48□□□□□ -0.73
PVT1-203ENST00000513868 S1PR3Q99500 378 aa10.48□□□□□ -0.73
PVT1-203ENST00000513868 PRELID3BQ9Y3B1 194 aa10.48□□□□□ -0.73
PVT1-203ENST00000513868 TNCP24821 2201 aa10.48□□□□□ -0.73
PVT1-203ENST00000513868 FAM24AA6NFZ4 105 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 ATG12O94817 140 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 KIR2DS2P43631 304 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 GPR6P46095 362 aaPredicted RBP10.47□□□□□ -0.73
PVT1-203ENST00000513868 DLX1P56177 255 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 NHLH2Q02577 135 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 OR9G1Q8NH87 305 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 PCNPQ8WW12 178 aaKnown RBP10.47□□□□□ -0.73
PVT1-203ENST00000513868 RAB39BQ96DA2 213 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 ADTRPQ96IZ2 230 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 GSX2Q9BZM3 304 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 TMEM133Q9H2Q1 129 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 NARFLQ9H6Q4 476 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 LYRM2Q9NU23 88 aaPredicted RBP10.47□□□□□ -0.73
PVT1-203ENST00000513868 FBXL17Q9UF56 701 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 SESN1Q9Y6P5 492 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 WNK2Q9Y3S1 2297 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 MED13LQ71F56 2210 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 IGSF23A1L1A6 192 aa10.47□□□□□ -0.73
PVT1-203ENST00000513868 FAM90A26D6RGX4 464 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms