RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 TAF15Q92804 592 aaKnown RBP eCLIP7.68□□□□□ -1.18
VCAN-208ENST00000512590 NPIPB4C9JG80 1138 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 RNF223E7ERA6 249 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 TYROBPO43914 113 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 IGHV3-53P01767 116 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 DEFB130BP0DP73 79 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 DEFB130AP0DP74 79 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 ERVS71-1P61550 626 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 IL24Q13007 206 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 TCF24Q7RTU0 167 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 SMIM19Q96E16 107 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 MYEOVQ96EZ4 313 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 Q9N2K0 584 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 DLL3Q9NYJ7 618 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 KBTBD11-OT1A0A1B0GTJ5 212 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 TOMM40O96008 361 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 TBR1Q16650 682 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 TMEM158Q8WZ71 300 aa7.68□□□□□ -1.18
VCAN-208ENST00000512590 TRGV1A0A0A0MS02 117 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 TRAV12-3A0A0B4J271 114 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 FAAP20Q6NZ36 180 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 THAP8Q8NA92 274 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 IL17DQ8TAD2 202 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 LIPT2A6NK58 231 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 ZNF729A6NN14 1252 aaPredicted RBP7.67□□□□□ -1.18
VCAN-208ENST00000512590 MOSP00540 346 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 OPRL1P41146 370 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 TOLLIPQ9H0E2 274 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 CCL28Q9NRJ3 127 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 A0A0A6YYD5 115 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 PNRC1Q12796 327 aaPredicted RBP7.67□□□□□ -1.18
VCAN-208ENST00000512590 CDK5R1Q15078 307 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 LCN12Q6JVE5 192 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 PGLYRP4Q96LB8 373 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 ZNF488Q96MN9 340 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 NPCDR1Q9BY65 106 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 SSBP1Q04837 148 aaKnown RBP7.67□□□□□ -1.18
VCAN-208ENST00000512590 IL13RA2Q14627 380 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 MESTQ5EB52 335 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 SAPCD1Q5SSQ6 148 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 OR2K2Q8NGT1 345 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 MRGPRFQ96AM1 343 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 ZNF48Q96MX3 618 aaPredicted RBP7.67□□□□□ -1.18
VCAN-208ENST00000512590 SLC25A37Q9NYZ2 338 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 KLK13Q9UKR3 277 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 IFITM5A6NNB3 132 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 NPIPB8E9PQR5 432 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 NPIPB9F8W1W9 429 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 NPIPB7O75200 414 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 BTG1P62324 171 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 CDCP2Q5VXM1 449 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 PEAR1Q5VY43 1037 aaPredicted RBP7.67□□□□□ -1.18
VCAN-208ENST00000512590 ZNF826PQ6ZT77 177 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 OR5AU1Q8NGC0 362 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 MBD3L1Q8WWY6 194 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 SRSF12Q8WXF0 261 aaKnown RBP7.67□□□□□ -1.18
VCAN-208ENST00000512590 ANAPC16Q96DE5 110 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 PSORS1C1Q9UIG5 152 aa7.67□□□□□ -1.18
VCAN-208ENST00000512590 OR4D5Q8NGN0 318 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 C10orf35Q96D05 121 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 CLPSL1A2RUU4 121 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 CLDN34H7C241 214 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 Q6ZNB5 142 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 OR11H7Q8NGC8 314 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 RICTORQ6R327 1708 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 SPINT1O43278 529 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 PKIAP61925 76 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 PTHLHP12272 177 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 NOVP48745 357 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 SS18Q15532 418 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 UQCC3Q6UW78 93 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 C10orf111Q8N326 155 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 RBFOX1Q9NWB1 397 aaKnown RBP7.66□□□□□ -1.18
VCAN-208ENST00000512590 NUMA1Q14980 2115 aa7.66□□□□□ -1.18
VCAN-208ENST00000512590 C3P01024 1663 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 TRAV14DV4A0A0A6YYC5 116 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 TRAV24A0A0B4J272 114 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 VWC2LB2RUY7 222 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 GGTLC3B5MD39 225 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 TRGC2P03986 189 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 PSG1P11464 419 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 ZNF25P17030 456 aaPredicted RBP7.65□□□□□ -1.18
VCAN-208ENST00000512590 CTGFP29279 349 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 RPS11P62280 158 aaKnown RBP eCLIP7.65□□□□□ -1.18
VCAN-208ENST00000512590 DGCR2P98153 550 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 BSXQ3C1V8 233 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 PSMG4Q5JS54 123 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 NPVFQ9HCQ7 196 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 CLEC2DQ9UHP7 191 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 DSPPQ9NZW4 1301 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 RPL36A-HNRNPH2H7BZ11 118 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 TSPAN2O60636 221 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 IFI27P40305 119 aaPredicted RBP7.65□□□□□ -1.18
VCAN-208ENST00000512590 IER3P46695 156 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 FHITP49789 147 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 SLC25A1P53007 311 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 UCP3P55916 312 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 FGF12P61328 243 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 HBBP68871 147 aa7.65□□□□□ -1.18
VCAN-208ENST00000512590 TMEM30BQ3MIR4 351 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms