RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 PRR20DP86480 221 aa7.46□□□□□ -1.22
NR1I3-228ENST00000511676 PRR20BP86481 221 aa7.46□□□□□ -1.22
NR1I3-228ENST00000511676 PRR20AP86496 221 aa7.46□□□□□ -1.22
NR1I3-228ENST00000511676 SGMS2Q8NHU3 365 aa7.46□□□□□ -1.22
NR1I3-228ENST00000511676 LSM10Q969L4 123 aaKnown RBP7.46□□□□□ -1.22
NR1I3-228ENST00000511676 TP53RKQ96S44 253 aa7.46□□□□□ -1.22
NR1I3-228ENST00000511676 METTL8Q9H825 291 aaKnown RBP7.46□□□□□ -1.22
NR1I3-228ENST00000511676 PRELID3BQ9Y3B1 194 aa7.46□□□□□ -1.22
NR1I3-228ENST00000511676 IGHV4-30-2A0A087WSY4 118 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 A0A1B0GU03 582 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 VWC2LB2RUY7 222 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 HSD17B6O14756 317 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 TXNL1O43396 289 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 ENSAO43768 121 aaKnown RBP7.45□□□□□ -1.22
NR1I3-228ENST00000511676 SLC25A4P12235 298 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 IL3RAP26951 378 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 THBS3P49746 956 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 ERVFRD-1P60508 538 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 CD300CQ08708 224 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 IL15RAQ13261 267 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 CT45A1Q5HYN5 189 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 AVPI1Q5T686 147 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 DHRS7BQ6IAN0 325 aaPredicted RBP7.45□□□□□ -1.22
NR1I3-228ENST00000511676 TMEM65Q6PI78 240 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 C12orf54Q6X4T0 127 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 ZNF695Q8IW36 515 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 LINC01356Q8N9X3 169 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 UXS1Q8NBZ7 420 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 BEND2Q8NDZ0 799 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 OR9G1Q8NH87 305 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 CT45A3Q8NHU0 189 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 ZNF418Q8TF45 676 aaPredicted RBP7.45□□□□□ -1.22
NR1I3-228ENST00000511676 TMEM186Q96B77 213 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 S1PR3Q99500 378 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 AIFM2Q9BRQ8 373 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 PDCD10Q9BUL8 212 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 PARP12Q9H0J9 701 aaKnown RBP7.45□□□□□ -1.22
NR1I3-228ENST00000511676 TMEM133Q9H2Q1 129 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 SDHAF2Q9NX18 166 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 COA4Q9NYJ1 87 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 COMMD9Q9P000 198 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 PSG11Q9UQ72 335 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 KPTNQ9Y664 436 aa7.45□□□□□ -1.22
NR1I3-228ENST00000511676 SONP18583 2426 aaKnown RBP7.44□□□□□ -1.22
NR1I3-228ENST00000511676 LOC105371242A0A075B767 164 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 C5orf51A6NDU8 294 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 B4DSR2 109 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 FOXH1O75593 365 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 LY86O95711 162 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 FGF2P09038 288 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 RRASP10301 218 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 LYL1P12980 280 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 DUTP33316 252 aaKnown RBP7.44□□□□□ -1.22
NR1I3-228ENST00000511676 KRTAP1-1Q07627 177 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 C2orf68Q2NKX9 166 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 NMSQ5H8A3 153 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 FAM120AOSQ5T036 256 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 PRAMEF5Q5TYX0 476 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 DCAF12L2Q5VW00 463 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 TMEM268Q5VZI3 342 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 GGNBP1Q5YKI7 109 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 ZNF833PQ6ZTB9 187 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 C5orf24Q7Z6I8 188 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 SELENOHQ8IZQ5 122 aaKnown RBP7.44□□□□□ -1.22
NR1I3-228ENST00000511676 C11orf42Q8N5U0 333 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 SLC35G3Q8N808 338 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 MAPK1IP1LQ8NDC0 245 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 UBALD1Q8TB05 177 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 PCGF1Q9BSM1 259 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 C19orf24Q9BVV8 132 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 PLEKHA2Q9HB19 425 aa7.44□□□□□ -1.22
NR1I3-228ENST00000511676 AMMECR1Q9Y4X0 333 aaPredicted RBP7.44□□□□□ -1.22
NR1I3-228ENST00000511676 IGHV3-43A0A0B4J1X8 118 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 FAM90A26D6RGX4 464 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 G3V3Q6 166 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 TRIM77I1YAP6 450 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 J3QR06 171 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 ST8SIA5O15466 376 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 NDUFS7O75251 213 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 ADAP1O75689 374 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 LY6HO94772 140 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 IGHV3-43DP0DP04 118 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 IGHV4-31P0DP07 118 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 MMP9P14780 707 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 CCL3L1P16619 93 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 OMGP23515 440 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 PRTN3P24158 256 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 NFYBP25208 207 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 PSMB6P28072 239 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 PRRX1P54821 245 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 LMO4P61968 165 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 RELBQ01201 579 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 PAX2Q02962 417 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 ZNF345Q14585 488 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 IAH1Q2TAA2 248 aaPredicted RBP7.43□□□□□ -1.22
NR1I3-228ENST00000511676 THOC7Q6I9Y2 204 aaKnown RBP7.43□□□□□ -1.22
NR1I3-228ENST00000511676 C11orf87Q6NUJ2 197 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 ODF3L1Q8IXM7 274 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 ZNF525Q8N782 197 aa7.43□□□□□ -1.22
NR1I3-228ENST00000511676 ZBTB8BQ8NAP8 495 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms