RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 Q8IYB0 196 aa12.65□□□□□ -0.38
USP38-202ENST00000510377 DNASE2BQ8WZ79 361 aa12.65□□□□□ -0.38
USP38-202ENST00000510377 C14orf144Q96I85 54 aa12.65□□□□□ -0.38
USP38-202ENST00000510377 EGLN1Q9GZT9 426 aa12.65□□□□□ -0.38
USP38-202ENST00000510377 KLK10O43240 276 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 CCKARP32238 428 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 OTX1P32242 354 aaPredicted RBP12.64□□□□□ -0.39
USP38-202ENST00000510377 RPL23P62829 140 aaKnown RBP12.64□□□□□ -0.39
USP38-202ENST00000510377 NMSQ5H8A3 153 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 ACSM6Q6P461 480 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 OR2M7Q8NG81 312 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 IMMP1LQ96LU5 166 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 C2orf16Q68DN1 1984 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 MRPL14Q6P1L8 145 aaKnown RBP12.64□□□□□ -0.39
USP38-202ENST00000510377 LURAP1LQ8IV03 231 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 VKORC1L1Q8N0U8 176 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 OR2Z1Q8NG97 314 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 SAP25Q8TEE9 199 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A10PA6NDY2 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A18PA6NE21 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A16PA6NEW6 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A20PA6NIJ5 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A8PA6NJQ4 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A7PA6NKC0 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A22PA8MWA6 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A12PA8MX19 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A5PA8MXJ8 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A23PA8MXZ1 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 HBZP02008 142 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A15PP0C7V4 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A13PP0C7W8 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A14PP0C7W9 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 FAM90A24PP0C7X0 464 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 CYP2G1PQ6ZSU1 146 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 OR4P4Q8NGL7 312 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 REPIN1Q9BWE0 567 aaKnown RBP12.64□□□□□ -0.39
USP38-202ENST00000510377 ZNF331Q9NQX6 463 aaPredicted RBP12.64□□□□□ -0.39
USP38-202ENST00000510377 CLCF1Q9UBD9 225 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 AMBPP02760 352 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 MIC13Q5XKP0 118 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 MRPL54Q6P161 138 aaKnown RBP12.64□□□□□ -0.39
USP38-202ENST00000510377 SCCPDHQ8NBX0 429 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 HSPB9Q9BQS6 159 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 IL36GQ9NZH8 169 aa12.64□□□□□ -0.39
USP38-202ENST00000510377 WNT9BO14905 357 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 SUMO1P63165 101 aaKnown RBP12.63□□□□□ -0.39
USP38-202ENST00000510377 ARL16Q0P5N6 197 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 HERPUD1Q15011 391 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 NOL4LQ96MY1 436 aaPredicted RBP12.63□□□□□ -0.39
USP38-202ENST00000510377 IMMP2LQ96T52 175 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 ZNF716A6NP11 495 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 SNURFLB1AK76 121 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 FGF5P12034 268 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 GNG10P50151 68 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 KIAA1644Q3SXP7 199 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 MISP3Q96FF7 219 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 KLF13Q9Y2Y9 288 aaPredicted RBP12.63□□□□□ -0.39
USP38-202ENST00000510377 PKDREJQ9NTG1 2253 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 CD1BP29016 333 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 ATP5G3P48201 142 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 SSPNQ14714 243 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 SMIM21Q3B7S5 101 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 TMEM105Q8N8V8 129 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 ACY3Q96HD9 319 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 NAGKQ9UJ70 344 aa12.63□□□□□ -0.39
USP38-202ENST00000510377 USF3Q68DE3 2245 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 TRGV5A0A0B4J1U4 118 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 IRF2P14316 349 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 CD33P20138 364 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 CD81P60033 236 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 PLPPR1Q8TBJ4 325 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 LRRC29Q8WV35 223 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 HSD17B10Q99714 261 aaKnown RBP12.62□□□□□ -0.39
USP38-202ENST00000510377 PSMG3Q9BT73 122 aaPredicted RBP12.62□□□□□ -0.39
USP38-202ENST00000510377 C1QTNF5Q9BXJ0 243 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 TRAV24A0A0B4J272 114 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 ODAMA1E959 279 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 CBLN1P23435 193 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 FAM90A2PQ658T7 463 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 C20orf204Q6ZNR8 217 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 TCF23Q7RTU1 214 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 RAMP3O60896 148 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 GCSAMLQ5JQS6 135 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 OR1L6Q8NGR2 347 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 DEPPQ9NTK1 212 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 SLC35D1Q9NTN3 355 aa12.62□□□□□ -0.39
USP38-202ENST00000510377 LILRA1O75019 489 aa12.61□□□□□ -0.39
USP38-202ENST00000510377 GCGP01275 180 aa12.61□□□□□ -0.39
USP38-202ENST00000510377 RNPS1Q15287 305 aaKnown RBP12.61□□□□□ -0.39
USP38-202ENST00000510377 LYG1Q8N1E2 194 aa12.61□□□□□ -0.39
USP38-202ENST00000510377 RPP25LQ8N5L8 163 aaKnown RBP12.61□□□□□ -0.39
USP38-202ENST00000510377 TMEM251Q8N6I4 163 aa12.61□□□□□ -0.39
USP38-202ENST00000510377 OR5P3Q8WZ94 311 aa12.61□□□□□ -0.39
USP38-202ENST00000510377 FER1L6-AS2Q96M78 137 aa12.61□□□□□ -0.39
USP38-202ENST00000510377 SIGLEC12Q96PQ1 595 aa12.61□□□□□ -0.39
USP38-202ENST00000510377 KCNIP2Q9NS61 270 aa12.61□□□□□ -0.39
USP38-202ENST00000510377 DLL1O00548 723 aa12.61□□□□□ -0.39
USP38-202ENST00000510377 OR10J1P30954 320 aa12.61□□□□□ -0.39
USP38-202ENST00000510377 NTF4P34130 210 aa12.61□□□□□ -0.39
USP38-202ENST00000510377 SSTR5P35346 364 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms