RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CCL15Q16663 113 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 CEACAM16Q2WEN9 425 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 TDRG1Q3Y452 100 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 COA6Q5JTJ3 125 aaKnown RBP3.7□□□□□ -1.82
NIPBL-206ENST00000509429 SPANXN3Q5MJ09 141 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 CNIH2Q6PI25 160 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 GDPGP1Q6ZNW5 385 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF429Q86V71 674 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 SLC22A18ASQ8N1D0 253 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 TTC9CQ8N5M4 171 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 FAM71E2Q8N5Q1 922 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 COX18Q8N8Q8 333 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 SUMF2Q8NBJ7 301 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 SUMF1Q8NBK3 374 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 OR51A4Q8NGJ6 313 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF502Q8TBZ5 544 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 C10orf82Q8WW14 230 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 PSMF1Q92530 271 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 DYNLL2Q96FJ2 89 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF419Q96HQ0 510 aaPredicted RBP3.7□□□□□ -1.82
NIPBL-206ENST00000509429 PGLYRP3Q96LB9 341 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 RARRES2Q99969 163 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 DCTN5Q9BTE1 182 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 TMEM70Q9BUB7 260 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 ATG5Q9H1Y0 275 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 GLIPR2Q9H4G4 154 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 APOBEC3GQ9HC16 384 aaKnown RBP3.7□□□□□ -1.82
NIPBL-206ENST00000509429 ASF1BQ9NVP2 202 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 EHFQ9NZC4 300 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 DNAJC27Q9NZQ0 273 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 SHPKQ9UHJ6 478 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 KCNE5Q9UJ90 142 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 POMPQ9Y244 141 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 YTHDF2Q9Y5A9 579 aaKnown RBP3.7□□□□□ -1.82
NIPBL-206ENST00000509429 SSC5DA1L4H1 1573 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 BAZ2BQ9UIF8 2168 aaKnown RBP3.7□□□□□ -1.82
NIPBL-206ENST00000509429 SIPA1L1O43166 1804 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 NRXN2Q9P2S2 1712 aa3.7□□□□□ -1.82
NIPBL-206ENST00000509429 THSD7AQ9UPZ6 1657 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 IGKV6D-41A0A0C4DH26 115 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 IGHV1-69-2A0A0G2JMI3 117 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 LOC102725191A0A1B0GVB3 256 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 A0A1W2PP18 115 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 DHRS12A0PJE2 317 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 H3BQ15 152 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 SPINT2O43291 252 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 NDUFC2O95298 119 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 GPX1P07203 203 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 KLK2P20151 261 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 ARL2P36404 184 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 PGFP49763 221 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF84P51523 738 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 GPM6AP51674 278 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 UBE2E1P51965 193 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 SLC18A1P54219 525 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 FBXW4P57775 412 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 UBE2V2Q15819 145 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 OR2T5Q6IEZ7 315 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 UFSP1Q6NVU6 142 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 DNAJC24Q6P3W2 148 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 ZNF549Q6P9A3 640 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 IGFL2Q6UWQ7 119 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 STAC2Q6ZMT1 411 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 Q6ZRG5 221 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 C9orf47Q6ZRZ4 202 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 Q6ZTK2 550 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 COX8CQ7Z4L0 72 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 HSD11B1LQ7Z5J1 315 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 C17orf64Q86WR6 236 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 GAPTQ8N292 157 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 NRACQ8N912 160 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 TEX45Q8NA69 505 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 OR5AR1Q8NGP9 310 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 OR2T29Q8NH02 315 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 MFSD8Q8NHS3 518 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 PPTC7Q8NI37 304 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 LMO3Q8TAP4 145 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 ACY3Q96HD9 319 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 BMFQ96LC9 184 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 UBE2E2Q96LR5 201 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 PKMYT1Q99640 499 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 TMEM59Q9BXS4 323 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 DPY30Q9C005 99 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 CXXC4Q9H2H0 198 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 BANF2Q9H503 90 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 REEP1Q9H902 201 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 ACKR4Q9NPB9 350 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 SIX2Q9NPC8 291 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 RBM22Q9NW64 420 aaKnown RBP eCLIP3.69□□□□□ -1.82
NIPBL-206ENST00000509429 RNF186Q9NXI6 227 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 ASIC5Q9NY37 505 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 FAM30AQ9NZY2 134 aa3.69□□□□□ -1.82
NIPBL-206ENST00000509429 SOX21Q9Y651 276 aaPredicted RBP3.69□□□□□ -1.82
NIPBL-206ENST00000509429 ARID2Q68CP9 1835 aa3.68□□□□□ -1.82
NIPBL-206ENST00000509429 LOC107984640A0A0U1RRK4 108 aa3.68□□□□□ -1.82
NIPBL-206ENST00000509429 CCDC195A0A1B0GUA6 201 aa3.68□□□□□ -1.82
NIPBL-206ENST00000509429 A0A1B0GV50 99 aa3.68□□□□□ -1.82
NIPBL-206ENST00000509429 SMIM35A0A1B0GVV1 85 aa3.68□□□□□ -1.82
NIPBL-206ENST00000509429 MYBPHLA2RUH7 354 aa3.68□□□□□ -1.82
NIPBL-206ENST00000509429 FAM183AA6NL82 134 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms