RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 CLN8Q9UBY8 286 aa14.4□□□□□ -0.1
SQSTM1-211ENST00000506690 TRAV9-1A0A075B6T8 112 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 GJE1A6NN92 205 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 WDR1O75083 606 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 P0C879 139 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 Q0VG73 95 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 Q8N7P7 452 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 Q8N976 141 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 RAB1CQ92928 201 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 MRPL18Q9H0U6 180 aaKnown RBP14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 KCNS2Q9ULS6 477 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 G3V3Y1 287 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 SYNGR4O95473 234 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 CELA2AP08217 269 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 UBE2G2P60604 165 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 CCL7P80098 99 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 DRAM1Q8N682 238 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 ZNF488Q96MN9 340 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 CIB3Q96Q77 187 aaPredicted RBP14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 SLC45A2Q9UMX9 530 aa14.39□□□□□ -0.11
SQSTM1-211ENST00000506690 C17orf112F2Z3M2 114 aa14.38□□□□□ -0.11
SQSTM1-211ENST00000506690 TDGF1P13385 188 aa14.38□□□□□ -0.11
SQSTM1-211ENST00000506690 MMDQ15546 238 aa14.38□□□□□ -0.11
SQSTM1-211ENST00000506690 GMPPAQ96IJ6 420 aaPredicted RBP14.38□□□□□ -0.11
SQSTM1-211ENST00000506690 FOXJ2Q9P0K8 574 aa14.38□□□□□ -0.11
SQSTM1-211ENST00000506690 RNF114Q9Y508 228 aa14.38□□□□□ -0.11
SQSTM1-211ENST00000506690 RBM7Q9Y580 266 aaKnown RBP14.38□□□□□ -0.11
SQSTM1-211ENST00000506690 LRRC30A6NM36 301 aa14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 NDUFB8O95169 186 aa14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 BMP5P22003 454 aa14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 OR10G8Q8NGN5 311 aa14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 RNF2Q99496 336 aa14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 FBXL7Q9UJT9 491 aa14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 F2Z2F3 143 aa14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 B3GALT5-AS1P59052 145 aa14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 BAGE3Q86Y29 109 aa14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 BAGE2Q86Y30 109 aa14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 CCDC74BQ96LY2 380 aa14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 SAMD10Q9BYL1 202 aa14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 ZNF552Q9H707 407 aaPredicted RBP14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 CFAP54Q96N23 3096 aa14.37□□□□□ -0.11
SQSTM1-211ENST00000506690 TRAV39A0A0B4J263 110 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 RNF212BA8MTL3 300 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 CARD18P57730 90 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 MLF1P58340 268 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 RBX1P62877 108 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 ZNF90Q03938 601 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 PCOLCEQ15113 449 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 HLA-BQ31612 363 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 STPG4Q8N801 248 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 TXNDC17Q9BRA2 123 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 SH2D2AQ9NP31 389 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 IL36BQ9NZH7 164 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 ZG16O60844 167 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 RAMP3O60896 148 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 TRAPPC6AO75865 159 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 MMP23AO75900 390 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 SLC23A3Q6PIS1 610 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 MOB1BQ7L9L4 216 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 MRPL21Q7Z2W9 205 aaKnown RBP14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 GGNQ86UU5 652 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 C1orf174Q8IYL3 243 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 FAM58AQ8N1B3 248 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 SLC25A45Q8N413 288 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 OCC1Q8TAD7 63 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 ZNF703Q9H7S9 590 aaPredicted RBP14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 PRDM6Q9NQX0 595 aa14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.36□□□□□ -0.11
SQSTM1-211ENST00000506690 WDFY3Q8IZQ1 3526 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 TRAV38-1A0A0B4J264 116 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 ODAMA1E959 279 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 GPX1P07203 203 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 GCSAMLQ5JQS6 135 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 QTRT1Q9BXR0 403 aaKnown RBP14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 DIDO1Q9BTC0 2240 aaKnown RBP14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 SDK2Q58EX2 2172 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 C20orf202A1L168 122 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 C3orf80F5H4A9 247 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 G6PCP35575 357 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 RPS16P62249 146 aaKnown RBP14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 SIGLECL1Q8N7X8 197 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 RNASE8Q8TDE3 154 aaKnown RBP14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 ORAOV1Q8WV07 137 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 ZDHHC16Q969W1 377 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 APOBEC3DQ96AK3 386 aaPredicted RBP14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 LRFN3Q9BTN0 628 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 PPIAL4AQ9Y536 164 aa14.35□□□□□ -0.11
SQSTM1-211ENST00000506690 DIRC3C9JPN6 131 aa14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 ZNHIT1O43257 154 aa14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 CCNOP22674 350 aa14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 NRN1LQ496H8 165 aa14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 KRTCAP3Q53RY4 240 aa14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 Q6P435 159 aa14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 AKIRIN1Q9H9L7 192 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 UQCR10Q9UDW1 63 aa14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 COLQQ9Y215 455 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 MRPS17Q9Y2R5 130 aaKnown RBP14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 CCL25O15444 150 aa14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 SS18L1O75177 396 aaPredicted RBP14.34□□□□□ -0.11
SQSTM1-211ENST00000506690 THBS3P49746 956 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms