RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 RUNX1Q01196 453 aa10.07□□□□□ -0.8
LIN54-206ENST00000506560 ARL16Q0P5N6 197 aa10.07□□□□□ -0.8
LIN54-206ENST00000506560 CT45A1Q5HYN5 189 aa10.07□□□□□ -0.8
LIN54-206ENST00000506560 PRAMEF5Q5TYX0 476 aa10.07□□□□□ -0.8
LIN54-206ENST00000506560 GPR157Q5UAW9 335 aa10.07□□□□□ -0.8
LIN54-206ENST00000506560 IQCF2Q8IXL9 164 aa10.07□□□□□ -0.8
LIN54-206ENST00000506560 UBAC2Q8NBM4 344 aa10.07□□□□□ -0.8
LIN54-206ENST00000506560 CT45A3Q8NHU0 189 aa10.07□□□□□ -0.8
LIN54-206ENST00000506560 CISD1Q9NZ45 108 aaKnown RBP10.07□□□□□ -0.8
LIN54-206ENST00000506560 TMEM178BH3BS89 294 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 M0R1X1 148 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 CD3EP07766 207 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 CCL3L1P16619 93 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 GPR12P47775 334 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 UQCRFS1P47985 274 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 SWI5Q1ZZU3 235 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 SSX9Q7RTT3 188 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 LSM10Q969L4 123 aaKnown RBP10.06□□□□□ -0.8
LIN54-206ENST00000506560 ABHD14AQ9BUJ0 271 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 TMEM106BQ9NUM4 274 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 CTSZQ9UBR2 303 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 KBTBD11-OT1A0A1B0GTJ5 212 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 FCGR3BO75015 233 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 P0C879 139 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 DUTP33316 252 aaKnown RBP10.06□□□□□ -0.8
LIN54-206ENST00000506560 HAPLN4Q86UW8 402 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 ARV1Q9H2C2 271 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 ZFP57Q9NU63 452 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 CLN8Q9UBY8 286 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 JPT1Q9UK76 154 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 FAM96BQ9Y3D0 163 aa10.06□□□□□ -0.8
LIN54-206ENST00000506560 A0A1B0GV50 99 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 SYNGR2O43760 224 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 METTL15P1P0C7V9 234 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 MUC1P15941 1255 aaPredicted RBP10.05□□□□□ -0.8
LIN54-206ENST00000506560 DLX1P56177 255 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 PRB3Q04118 309 aaPredicted RBP10.05□□□□□ -0.8
LIN54-206ENST00000506560 CLRN3Q8NCR9 226 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 CA5BP1Q8WTZ4 195 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 ZDHHC16Q969W1 377 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 NKX6-2Q9C056 277 aaPredicted RBP10.05□□□□□ -0.8
LIN54-206ENST00000506560 NGBQ9NPG2 151 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 OR6C3Q9NZP0 311 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 YPEL1O60688 119 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 PVALBP20472 110 aaPredicted RBP10.05□□□□□ -0.8
LIN54-206ENST00000506560 SULT1A2P50226 295 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 MIDNQ504T8 468 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 TMEM88Q6PEY1 159 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 Q6ZRG5 221 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 YPEL2Q96QA6 119 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 SEBOXQ9HB31 216 aaPredicted RBP10.05□□□□□ -0.8
LIN54-206ENST00000506560 GFOD1Q9NXC2 390 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 SLC25A10Q9UBX3 287 aaPredicted RBP10.05□□□□□ -0.8
LIN54-206ENST00000506560 CSMD1Q96PZ7 3565 aa10.05□□□□□ -0.8
LIN54-206ENST00000506560 F12P00748 615 aaPredicted RBP10.04□□□□□ -0.8
LIN54-206ENST00000506560 CATR1Q13166 79 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 HNF4GQ14541 408 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 TRAT1Q6PIZ9 186 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 ZBTB34Q8NCN2 500 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 SMIM8Q96KF7 97 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 GINS3Q9BRX5 216 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 MMP24Q9Y5R2 645 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 PPIAL4EA0A075B759 164 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 SAA2-SAA4A0A096LPE2 208 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 TRGV10A0A0A0MS01 117 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 RNF212BA8MTL3 300 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 PPIAL4DF5H284 164 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 OR9G9P0C7N8 305 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 SAA2P0DJI9 122 aaPredicted RBP10.04□□□□□ -0.8
LIN54-206ENST00000506560 PPIAL4FP0DN26 164 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 SPP1P10451 314 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 ATP6V0CP27449 155 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 LOXP28300 417 aaPredicted RBP10.04□□□□□ -0.8
LIN54-206ENST00000506560 APOBEC3AP31941 199 aaPredicted RBP10.04□□□□□ -0.8
LIN54-206ENST00000506560 OR2B8PP59922 312 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 GUCA2BQ16661 112 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 FBXL19-AS1Q494R0 122 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 TMEM182Q6ZP80 229 aaPredicted RBP10.04□□□□□ -0.8
LIN54-206ENST00000506560 NDRG3Q9UGV2 375 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 PPIAL4AQ9Y536 164 aa10.04□□□□□ -0.8
LIN54-206ENST00000506560 TRAV3A0A0B4J244 114 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 LRRC30A6NM36 301 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 PLXNB1O43157 2135 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 SLC25A6P12236 298 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 ADCYAP1P18509 176 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 COL8A2P25067 703 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 SPANXN5Q5MJ07 72 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 PUSL1Q8N0Z8 303 aaKnown RBP10.03□□□□□ -0.8
LIN54-206ENST00000506560 EDARADDQ8WWZ3 215 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 ZNF251Q9BRH9 671 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 EGLN1Q9GZT9 426 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 RBKSQ9H477 322 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 FLNCQ14315 2725 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 MARCH11A6NNE9 402 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 ZG16O60844 167 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 ATG12O94817 140 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 TFF3Q07654 80 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 LYG1Q8N1E2 194 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 MUC15Q8N387 334 aa10.03□□□□□ -0.8
LIN54-206ENST00000506560 H1FXQ92522 213 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms