RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 C19orf25Q9UFG5 118 aaPredicted RBP13.43□□□□□ -0.26
SCLT1-208ENST00000506368 PILRBQ9UKJ0 227 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 LAMTOR2Q9Y2Q5 125 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 MRPS16Q9Y3D3 137 aaKnown RBP13.43□□□□□ -0.26
SCLT1-208ENST00000506368 ZFHX2Q9C0A1 2572 aaPredicted RBP13.43□□□□□ -0.26
SCLT1-208ENST00000506368 IGHV1OR21-1A0A087WYE8 117 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 A8MXE2 369 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 DIRC3C9JPN6 131 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 LMO7DNF2Z398 122 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 OR5G3P0C626 314 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 HNRNPA3P51991 378 aaKnown RBP13.43□□□□□ -0.26
SCLT1-208ENST00000506368 DSCR4P56555 118 aaPredicted RBP13.43□□□□□ -0.26
SCLT1-208ENST00000506368 LINC00310P59036 64 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 RPS20P60866 119 aaKnown RBP13.43□□□□□ -0.26
SCLT1-208ENST00000506368 PSG4Q00888 419 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 ZNF90Q03938 601 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 TDRG1Q3Y452 100 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 ZNF468Q5VIY5 522 aaPredicted RBP13.43□□□□□ -0.26
SCLT1-208ENST00000506368 WDR73Q6P4I2 378 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 ZNF738Q8NE65 137 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 FGF21Q9NSA1 209 aa13.43□□□□□ -0.26
SCLT1-208ENST00000506368 CACNA1EQ15878 2313 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 PMS2P5A8MQ11 134 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 IFNL4K9M1U5 179 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 ZNF253O75346 499 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 MPDU1O75352 247 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 GPX1P07203 203 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 IGLC2P0DOY2 106 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 IGLC3P0DOY3 106 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 CD38P28907 300 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 CEACAM21Q3KPI0 293 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 ZNF585BQ52M93 769 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 SPATA45Q537H7 98 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 MRGPRDQ8TDS7 321 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 GATAD1Q8WUU5 269 aa13.42□□□□□ -0.26
SCLT1-208ENST00000506368 EP300Q09472 2414 aaPredicted RBP13.41□□□□□ -0.26
SCLT1-208ENST00000506368 NDUFB4O95168 129 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 CDKN1AP38936 164 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 TRA2AQ13595 282 aaKnown RBP eCLIP13.41□□□□□ -0.26
SCLT1-208ENST00000506368 SSPNQ14714 243 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 WDR74Q6RFH5 385 aaPredicted RBP13.41□□□□□ -0.26
SCLT1-208ENST00000506368 COLCA1Q6ZS62 124 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 ZDHHC23Q8IYP9 409 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 PNKDQ8N490 385 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 CCDC74BQ96LY2 380 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 TXN2Q99757 166 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 QTRT1Q9BXR0 403 aaKnown RBP13.41□□□□□ -0.26
SCLT1-208ENST00000506368 KIAA2026Q5HYC2 2103 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 OTOGLQ3ZCN5 2332 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 A0A1B0GUS0 222 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 A0A1W2PR77 199 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 GRIFINA4D1Z8 144 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 HMGB3O15347 200 aaKnown RBP13.41□□□□□ -0.26
SCLT1-208ENST00000506368 IGLV2-14P01704 120 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 C1QTNF9P0C862 333 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 BMP5P22003 454 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 RAC1P63000 192 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 C19orf35Q6ZS72 473 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 SHISA6Q6ZSJ9 500 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 FGFRL1Q8N441 504 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 OR5T1Q8NG75 326 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 RDH5Q92781 318 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 STARD4Q96DR4 205 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.41□□□□□ -0.26
SCLT1-208ENST00000506368 BET1LQ9NYM9 111 aa13.41□□□□□ -0.26
SCLT1-208ENST00000506368 C9JCJ5 164 aa13.4□□□□□ -0.26
SCLT1-208ENST00000506368 CFIP05156 583 aa13.4□□□□□ -0.26
SCLT1-208ENST00000506368 PMCHL1Q16048 86 aa13.4□□□□□ -0.26
SCLT1-208ENST00000506368 IZUMO4Q1ZYL8 232 aa13.4□□□□□ -0.26
SCLT1-208ENST00000506368 RSPO4Q2I0M5 234 aaPredicted RBP13.4□□□□□ -0.26
SCLT1-208ENST00000506368 OR5A2Q8NGI9 324 aa13.4□□□□□ -0.26
SCLT1-208ENST00000506368 FOXB1Q99853 325 aa13.4□□□□□ -0.26
SCLT1-208ENST00000506368 CHCHD2Q9Y6H1 151 aaPredicted RBP13.4□□□□□ -0.26
SCLT1-208ENST00000506368 NDUFB8O95169 186 aa13.4□□□□□ -0.27
SCLT1-208ENST00000506368 CD1BP29016 333 aa13.4□□□□□ -0.27
SCLT1-208ENST00000506368 TFPI2P48307 235 aa13.4□□□□□ -0.27
SCLT1-208ENST00000506368 UBE2G2P60604 165 aa13.4□□□□□ -0.27
SCLT1-208ENST00000506368 MMDQ15546 238 aa13.4□□□□□ -0.27
SCLT1-208ENST00000506368 DCAF12Q5T6F0 453 aa13.4□□□□□ -0.27
SCLT1-208ENST00000506368 TCF23Q7RTU1 214 aa13.4□□□□□ -0.27
SCLT1-208ENST00000506368 OR6C1Q96RD1 312 aa13.4□□□□□ -0.27
SCLT1-208ENST00000506368 DEFB126Q9BYW3 111 aa13.4□□□□□ -0.27
SCLT1-208ENST00000506368 SLC35D1Q9NTN3 355 aa13.4□□□□□ -0.27
SCLT1-208ENST00000506368 A0A1W2PPV4 95 aa13.39□□□□□ -0.27
SCLT1-208ENST00000506368 CCL25O15444 150 aa13.39□□□□□ -0.27
SCLT1-208ENST00000506368 PPBPP02775 128 aa13.39□□□□□ -0.27
SCLT1-208ENST00000506368 NBL1P41271 181 aa13.39□□□□□ -0.27
SCLT1-208ENST00000506368 LGALS4P56470 323 aa13.39□□□□□ -0.27
SCLT1-208ENST00000506368 RAC3P60763 192 aa13.39□□□□□ -0.27
SCLT1-208ENST00000506368 TRIP6Q15654 476 aaKnown RBP13.39□□□□□ -0.27
SCLT1-208ENST00000506368 Q6ZN92 141 aa13.39□□□□□ -0.27
SCLT1-208ENST00000506368 Q8N976 141 aa13.39□□□□□ -0.27
SCLT1-208ENST00000506368 OR1L6Q8NGR2 347 aa13.39□□□□□ -0.27
SCLT1-208ENST00000506368 ZNF837Q96EG3 531 aaPredicted RBP13.39□□□□□ -0.27
SCLT1-208ENST00000506368 KCNS1Q96KK3 526 aa13.39□□□□□ -0.27
SCLT1-208ENST00000506368 UCN2Q96RP3 112 aa13.39□□□□□ -0.27
SCLT1-208ENST00000506368 COX11Q9Y6N1 276 aa13.39□□□□□ -0.27
SCLT1-208ENST00000506368 CABIN1Q9Y6J0 2220 aa13.39□□□□□ -0.27
SCLT1-208ENST00000506368 LRRC30A6NM36 301 aa13.38□□□□□ -0.27
SCLT1-208ENST00000506368 FCN1O00602 326 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms