RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 BPGMP07738 259 aa1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 HLA-DRB5Q30154 266 aa1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 DNAL1Q4LDG9 190 aa1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 LHFPL1Q86WI0 220 aa1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 C1orf174Q8IYL3 243 aa1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 LRRC34Q8IZ02 419 aa1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 RIBC1Q8N443 379 aaPredicted RBP1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 LFNGQ8NES3 379 aa1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 Q8WTZ3 238 aa1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 SLC35G5Q96KT7 338 aa1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 ATP6V1G3Q96LB4 118 aa1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 SPZ1Q9BXG8 430 aa1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 NKX6-2Q9C056 277 aaPredicted RBP1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 HDGFL3Q9Y3E1 203 aa1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 FAM215AQ9Y5M1 114 aa1.22□□□□□ -2.21
TOPBP1-204ENST00000505804 ZNF532Q9HCE3 1301 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 TMSB15BA0A087X1C1 80 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 TRAV8-1A0A0A6YYK1 113 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 A0A1W2PQD3 144 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 AZIN1O14977 448 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 LINC00614P0C842 121 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 CLDN12P56749 244 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 TAS2R30P59541 319 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 LRRC26Q2I0M4 334 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 HSP90B2PQ58FF3 399 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 SPATA12Q7Z6I5 190 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 SLC35E3Q7Z769 313 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 IQCF2Q8IXL9 164 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 DEFB119Q8N690 84 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 DAND5Q8N907 189 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 OR5J2Q8NH18 312 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 CLDND2Q8NHS1 167 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 LHFPL5Q8TAF8 219 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 CYGBQ8WWM9 190 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 RNASE6Q93091 150 aaKnown RBP1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 MRPL32Q9BYC8 188 aaKnown RBP1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 SPACA1Q9HBV2 294 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 EMC3Q9P0I2 261 aa1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 FN1P02751 2386 aaKnown RBP1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 DICER1Q9UPY3 1922 aaKnown RBP1.21□□□□□ -2.22
TOPBP1-204ENST00000505804 HELZ2Q9BYK8 2649 aaKnown RBP1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 NAV1Q8NEY1 1877 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 FBN3Q75N90 2809 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 TRGV2A0A075B6R0 118 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 TRGV5A0A0B4J1U4 118 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 TRAV41A0A0B4J266 112 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 FTCDNL1E5RQL4 147 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 CCRL2O00421 344 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 CETN3O15182 167 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 ORM1P02763 201 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 CXCL3P19876 107 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 BTN3A2P78410 334 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 HPCAP84074 193 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 PABPC1L2AQ5JQF8 200 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 CLEC6AQ6EIG7 209 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 COA5Q86WW8 74 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 LRRC28Q86X40 367 aaPredicted RBP1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 OR5L1Q8NGL2 311 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 OR10D3Q8NH80 312 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 NDEL1Q9GZM8 345 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 NRBP2Q9NSY0 501 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 CD300AQ9UGN4 299 aa1.2□□□□□ -2.22
TOPBP1-204ENST00000505804 TMEM213A2RRL7 107 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 A8MUN3 132 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 BHLHE40O14503 412 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 NDUFB2O95178 105 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 YEATS4O95619 227 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 PET100P0DJ07 73 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 CXCL2P19875 107 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 MIPP30301 263 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 TMEM33P57088 247 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 GNA12Q03113 381 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 SLC38A11Q08AI6 406 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 GNA13Q14344 377 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 PDPK2PQ6A1A2 396 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 SPATA24Q86W54 205 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 C10orf126Q8N4M7 172 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 PACRGLQ8N7B6 248 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 SLC37A2Q8TED4 501 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 CPNE2Q96FN4 548 aaPredicted RBP1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 CHMP4BQ9H444 224 aaKnown RBP1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 ZNHIT6Q9NWK9 470 aaKnown RBP1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 DOK5Q9P104 306 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 HHLA3Q9XRX5 114 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 TP53TG1Q9Y2A0 90 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 NOSIPQ9Y314 301 aaKnown RBP1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 NUMA1Q14980 2115 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 PTPRBP23467 1997 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 SIPA1L1O43166 1804 aa1.19□□□□□ -2.22
TOPBP1-204ENST00000505804 RP1L1Q8IWN7 2480 aaPredicted RBP1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 ZNF705FA8MVS1 300 aaPredicted RBP1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 TXNDC9O14530 226 aa1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 CD24P25063 80 aa1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 MAGEA12P43365 314 aa1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 GABRA2P47869 451 aa1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 IDH3GP51553 393 aaPredicted RBP1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 EMP2P54851 167 aa1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 RBM11P57052 281 aaKnown RBP1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 LGALS9BQ3B8N2 356 aa1.18□□□□□ -2.22
TOPBP1-204ENST00000505804 ZNF791Q3KP31 576 aaPredicted RBP1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms