RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CT45A7P0DMV0 189 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 ANXA3P12429 323 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 SLC25A16P16260 332 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 PRTN3P24158 256 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 GPR12P47775 334 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 ARF6P62330 175 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 KLRD1Q13241 179 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 HLA-DRB5Q30154 266 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 NMSQ5H8A3 153 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 GGNBP1Q5YKI7 109 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 ZNF66Q6ZN08 573 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 C1orf122Q6ZSJ8 110 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 CMTM1Q8IZ96 169 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 SLC35G3Q8N808 338 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 ZNF383Q8NA42 475 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 BEND2Q8NDZ0 799 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 OR11H6Q8NGC7 330 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 OR11H4Q8NGC9 324 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 OR9G1Q8NH87 305 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 COQ8AQ8NI60 647 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 IL22RA2Q969J5 263 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 PPP1R14BQ96C90 147 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 RAB39BQ96DA2 213 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 AJUBAQ96IF1 538 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 SIRT7Q9NRC8 400 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 ONECUT1Q9UBC0 465 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 INSIG2Q9Y5U4 225 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 KPTNQ9Y664 436 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.44□□□□□ -1.06
TPM3-217ENST00000504663 SVEP1Q4LDE5 3571 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 RNASEK-C17orf49H0YIS7 233 aa8.43□□□□□ -1.06
TPM3-217ENST00000504663 M0R1X1 148 aa8.43□□□□□ -1.06
TPM3-217ENST00000504663 FOXH1O75593 365 aa8.43□□□□□ -1.06
TPM3-217ENST00000504663 B3GALNT1O75752 331 aa8.43□□□□□ -1.06
TPM3-217ENST00000504663 S1PR2O95136 353 aa8.43□□□□□ -1.06
TPM3-217ENST00000504663 DNASE1P24855 282 aa8.43□□□□□ -1.06
TPM3-217ENST00000504663 Q5PR19 223 aa8.43□□□□□ -1.06
TPM3-217ENST00000504663 FAM71F2Q6NXP2 309 aa8.43□□□□□ -1.06
TPM3-217ENST00000504663 VMO1Q7Z5L0 202 aa8.43□□□□□ -1.06
TPM3-217ENST00000504663 LGI3Q8N145 548 aa8.43□□□□□ -1.06
TPM3-217ENST00000504663 LYG1Q8N1E2 194 aa8.43□□□□□ -1.06
TPM3-217ENST00000504663 ABHD12Q8N2K0 398 aa8.43□□□□□ -1.06
TPM3-217ENST00000504663 DRAXINQ8NBI3 349 aaPredicted RBP8.43□□□□□ -1.06
TPM3-217ENST00000504663 HSD17B10Q99714 261 aaKnown RBP8.43□□□□□ -1.06
TPM3-217ENST00000504663 MRPL20Q9BYC9 149 aaKnown RBP8.43□□□□□ -1.06
TPM3-217ENST00000504663 FAM212BQ9NTI7 297 aaPredicted RBP8.43□□□□□ -1.06
TPM3-217ENST00000504663 LIN7CQ9NUP9 197 aaKnown RBP8.43□□□□□ -1.06
TPM3-217ENST00000504663 RBM7Q9Y580 266 aaKnown RBP8.43□□□□□ -1.06
TPM3-217ENST00000504663 ITPR3Q14573 2671 aa8.43□□□□□ -1.06
TPM3-217ENST00000504663 A0A1W2PPH5 198 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 RAB29O14966 203 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 RBFOX2O43251 390 aaKnown RBP eCLIP8.42□□□□□ -1.06
TPM3-217ENST00000504663 C1QBP02746 253 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 HOXB5P09067 269 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 COX7A1P24310 79 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 GZMKP49863 264 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 DVL1P1P54792 670 aaPredicted RBP8.42□□□□□ -1.06
TPM3-217ENST00000504663 RAP2BP61225 183 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 PAX8Q06710 450 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 OR2B11Q5JQS5 317 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 TMEM268Q5VZI3 342 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 PRSS57Q6UWY2 283 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 Q6ZRM9 215 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 FAM219AQ8IW50 185 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 PNKDQ8N490 385 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 UXS1Q8NBZ7 420 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 RBPMSQ93062 196 aaKnown RBP8.42□□□□□ -1.06
TPM3-217ENST00000504663 SEC22AQ96IW7 307 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 NABP2Q9BQ15 211 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 CLEC7AQ9BXN2 247 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 CHIAQ9BZP6 476 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 C11orf1Q9H5F2 150 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 METTL8Q9H825 291 aaKnown RBP8.42□□□□□ -1.06
TPM3-217ENST00000504663 KCNIP3Q9Y2W7 256 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 ZANQ9Y493 2812 aa8.42□□□□□ -1.06
TPM3-217ENST00000504663 DUXBA0A1W2PPF3 345 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 A0A1W2PPI3 338 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 RNF212BA8MTL3 300 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 H0YIZ8 118 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 H0YJW9 148 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 BUB1B-PAK6H3BSN5 160 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 PITX3O75364 302 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 USF1P22415 310 aaPredicted RBP8.41□□□□□ -1.06
TPM3-217ENST00000504663 LPAR6P43657 344 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 THBS3P49746 956 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 NKX2-5P52952 324 aaPredicted RBP8.41□□□□□ -1.06
TPM3-217ENST00000504663 SRPXP78539 464 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 LOXL1Q08397 574 aaPredicted RBP8.41□□□□□ -1.06
TPM3-217ENST00000504663 CATR1Q13166 79 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 MIDNQ504T8 468 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 FBLN7Q53RD9 439 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 SAMD5Q5TGI4 173 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 LAMTOR1Q6IAA8 161 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 SPAG16Q8N0X2 631 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 DYNAPQ8N1N2 210 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 TCTEX1D1Q8N7M0 179 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 ZBTB8BQ8NAP8 495 aaPredicted RBP8.41□□□□□ -1.06
TPM3-217ENST00000504663 OR4D5Q8NGN0 318 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 TCTEX1D2Q8WW35 142 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 ASB13Q8WXK3 278 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms