RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 NRN1Q9NPD7 142 aa5.28□□□□□ -1.56
LINC02397-201ENST00000504409 TRAV8-4A0A0B4J246 113 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 ZIC2O95409 532 aaPredicted RBP5.27□□□□□ -1.57
LINC02397-201ENST00000504409 SRD5A2P31213 254 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 MFAP2P55001 183 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 COL10A1Q03692 680 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 ATXN8Q156A1 80 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 Q5BKY6 102 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 C6orf132Q5T0Z8 1188 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 LINC01465Q8N7H1 131 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 LINC00470Q9BZP3 86 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 FRRS1LQ9P0K9 344 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 GAGE12JA6NER3 117 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 GAGE7O76087 117 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 GAGE12FP0CL80 117 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 GAGE12GP0CL81 117 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 GAGE12IP0CL82 117 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 GAGE4Q13068 117 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 COL9A3Q14050 684 aaPredicted RBP5.27□□□□□ -1.57
LINC02397-201ENST00000504409 OR51G1Q8NGK1 321 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 ZNF519Q8TB69 540 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 IGHV2-26A0A0B4J1V2 119 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 FAM181BA6NEQ2 426 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 A6NIN4 97 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 TDGF1P13385 188 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 ZNF121P58317 390 aaPredicted RBP5.27□□□□□ -1.57
LINC02397-201ENST00000504409 RPL30P62888 115 aaKnown RBP5.27□□□□□ -1.57
LINC02397-201ENST00000504409 ATP23Q9Y6H3 246 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 LCTP09848 1927 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 RRHO14718 337 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 CRYAAP02489 173 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 THBDP07204 575 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 FBXO45P0C2W1 286 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 TMEM144Q7Z5S9 345 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 MISP3Q96FF7 219 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 ABHD17AQ96GS6 310 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 LILRA5A6NI73 299 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 CDC42EP2O14613 210 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 B3GALT4O96024 378 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 GJD4Q96KN9 370 aaPredicted RBP5.27□□□□□ -1.57
LINC02397-201ENST00000504409 TMEM131Q92545 1883 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 NCKAP5O14513 1909 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 PRICKLE3O43900 615 aaPredicted RBP5.27□□□□□ -1.57
LINC02397-201ENST00000504409 HBDP02042 147 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 ORMDL3Q8N138 153 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 SCNM1Q9BWG6 230 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 C1RLQ9NZP8 487 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 KLK13Q9UKR3 277 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 UBR3Q6ZT12 1888 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 J3QRE1 110 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 AGERQ15109 404 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 RHBDD2Q6NTF9 364 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 GLMPQ8WWB7 406 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 KLHDC2Q9Y2U9 406 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 TMEM258P61165 79 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 CACNG7P62955 275 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 NR0B2Q15466 257 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.27□□□□□ -1.57
LINC02397-201ENST00000504409 RSPO3Q9BXY4 272 aaPredicted RBP5.27□□□□□ -1.57
LINC02397-201ENST00000504409 MMP17Q9ULZ9 603 aa5.27□□□□□ -1.57
LINC02397-201ENST00000504409 YPEL1O60688 119 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 SRIP30626 198 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 SRYQ05066 204 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 DOCK11Q5JSL3 2073 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 H7C1H1 209 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 KLF4O43474 513 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 CHD3Q12873 2000 aaKnown RBP5.26□□□□□ -1.57
LINC02397-201ENST00000504409 FGF11Q92914 225 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 SSR4P51571 173 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 RAE1P78406 368 aaKnown RBP5.26□□□□□ -1.57
LINC02397-201ENST00000504409 SRSF1Q07955 248 aaKnown RBP eCLIP5.26□□□□□ -1.57
LINC02397-201ENST00000504409 KLRD1Q13241 179 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 VKORC1L1Q8N0U8 176 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 BAHD1Q8TBE0 780 aaPredicted RBP5.26□□□□□ -1.57
LINC02397-201ENST00000504409 FSCN3Q9NQT6 498 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 MED29Q9NX70 200 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 H3BMG7 143 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 DHHO43323 396 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 TOMM40O96008 361 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 IL6RP08887 468 aaPredicted RBP5.26□□□□□ -1.57
LINC02397-201ENST00000504409 EXOSC7Q15024 291 aaKnown RBP5.26□□□□□ -1.57
LINC02397-201ENST00000504409 CEACAM16Q2WEN9 425 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 SFTA2Q6UW10 78 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 SLC25A38Q96DW6 304 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 THAP10Q9P2Z0 257 aaPredicted RBP5.26□□□□□ -1.57
LINC02397-201ENST00000504409 A0A1B0GUT8 65 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 A0A1B0GX78 115 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 F2Z2F3 143 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 B4GALT3O60512 393 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 B4GALT2O60909 372 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 TMEM187Q14656 261 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 RPRMLQ8N4K4 120 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 SLC25A22Q9H936 323 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 GOLGA2P5Q9HBQ8 144 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 CENPVL1A0A0U1RR11 272 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 LINC01553A4QN01 128 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 GJB5O95377 273 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 WNT2P09544 360 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 TBR1Q16650 682 aa5.26□□□□□ -1.57
LINC02397-201ENST00000504409 DCAF12L2Q5VW00 463 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms