RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 C3orf80F5H4A9 247 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 IFNL4K9M1U5 179 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 PSPNO60542 156 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 S1PR2O95136 353 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 GYPAP02724 150 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 TUBG1P23258 451 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 OR3A1P47881 315 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 NUBP1P53384 320 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 TGFBR3Q03167 851 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 ESPL1Q14674 2120 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 SSX9Q7RTT3 188 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 BEND2Q8NDZ0 799 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 OR1L1Q8NH94 360 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 WDYHV1Q96HA8 205 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 OR51B6Q9H340 312 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 CHODLQ9H9P2 273 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 TUBG2Q9NRH3 451 aa12.55□□□□□ -0.4
SNF8-203ENST00000504000 CHD3Q12873 2000 aaKnown RBP12.54□□□□□ -0.4
SNF8-203ENST00000504000 ZG16O60844 167 aa12.54□□□□□ -0.4
SNF8-203ENST00000504000 MPDU1O75352 247 aa12.54□□□□□ -0.4
SNF8-203ENST00000504000 TNFSF15O95150 251 aa12.54□□□□□ -0.4
SNF8-203ENST00000504000 HBZP02008 142 aa12.54□□□□□ -0.4
SNF8-203ENST00000504000 CCKARP32238 428 aa12.54□□□□□ -0.4
SNF8-203ENST00000504000 MEOX1P50221 254 aa12.54□□□□□ -0.4
SNF8-203ENST00000504000 TRAT1Q6PIZ9 186 aa12.54□□□□□ -0.4
SNF8-203ENST00000504000 H2BFWTQ7Z2G1 175 aa12.54□□□□□ -0.4
SNF8-203ENST00000504000 C12orf49Q9H741 205 aa12.54□□□□□ -0.4
SNF8-203ENST00000504000 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.53□□□□□ -0.4
SNF8-203ENST00000504000 C17orf98A8MV24 154 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 A8MWP6 167 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 CDC34P49427 236 aaPredicted RBP12.53□□□□□ -0.4
SNF8-203ENST00000504000 ERVS71-1P61550 626 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 ZNF816Q0VGE8 651 aaPredicted RBP12.53□□□□□ -0.4
SNF8-203ENST00000504000 FOXL1Q12952 345 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 PSG7Q13046 419 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 Q8N7P7 452 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 UBALD1Q8TB05 177 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 TMEM18Q96B42 140 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 GMPPAQ96IJ6 420 aaPredicted RBP12.53□□□□□ -0.4
SNF8-203ENST00000504000 C2orf88Q9BSF0 95 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 PCGF1Q9BSM1 259 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 WDR83OSQ9Y284 106 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 MED12LQ86YW9 2145 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 C11orf94C9JXX5 98 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 F6UZH7 168 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 PAGE4O60829 102 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 SPINK2P20155 84 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 HTD2P86397 168 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 PDLIM3Q53GG5 364 aaPredicted RBP12.53□□□□□ -0.4
SNF8-203ENST00000504000 TMEM164Q5U3C3 297 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 INO80CQ6PI98 192 aaPredicted RBP12.53□□□□□ -0.4
SNF8-203ENST00000504000 FAM180AQ6UWF9 173 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 SLC25A40Q8TBP6 338 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 RHOVQ96L33 236 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 KCNIP2Q9NS61 270 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 PLA2G3Q9NZ20 509 aa12.53□□□□□ -0.4
SNF8-203ENST00000504000 A0A1W2PPQ1 181 aa12.52□□□□□ -0.41
SNF8-203ENST00000504000 C19orf67A6NJJ6 358 aa12.52□□□□□ -0.41
SNF8-203ENST00000504000 IDH3GP51553 393 aaPredicted RBP12.52□□□□□ -0.41
SNF8-203ENST00000504000 TMPRSS3P57727 454 aa12.52□□□□□ -0.41
SNF8-203ENST00000504000 UBE2NP61088 152 aaKnown RBP12.52□□□□□ -0.41
SNF8-203ENST00000504000 RPP30P78346 268 aaKnown RBP12.52□□□□□ -0.41
SNF8-203ENST00000504000 TFF3Q07654 80 aa12.52□□□□□ -0.41
SNF8-203ENST00000504000 LINC00696Q6ZRV3 163 aa12.52□□□□□ -0.41
SNF8-203ENST00000504000 LINC01551Q86U37 167 aa12.52□□□□□ -0.41
SNF8-203ENST00000504000 C11orf53Q8IXP5 236 aa12.52□□□□□ -0.41
SNF8-203ENST00000504000 OR52L2PQ8NGH6 319 aa12.52□□□□□ -0.41
SNF8-203ENST00000504000 OR52E5Q8NH55 327 aa12.52□□□□□ -0.41
SNF8-203ENST00000504000 WASF3Q9UPY6 502 aa12.52□□□□□ -0.41
SNF8-203ENST00000504000 ADH4P08319 380 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 TAS2R60P59551 318 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 C3AR1Q16581 482 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 TMEM144Q7Z5S9 345 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 MYPOPQ86VE0 399 aaPredicted RBP12.51□□□□□ -0.41
SNF8-203ENST00000504000 TMEM105Q8N8V8 129 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 NECAP1Q8NC96 275 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 COQ2Q96H96 371 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 ELOVL1Q9BW60 279 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 MARCH11A6NNE9 402 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 C15orf62A8K5M9 175 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 HMGB3O15347 200 aaKnown RBP12.51□□□□□ -0.41
SNF8-203ENST00000504000 SLC31A2O15432 143 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 GRPP07492 148 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 CD46P15529 392 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 NPPCP23582 126 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 CD1BP29016 333 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 AESQ08117 197 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 RTP5Q14D33 572 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 ACP7Q6ZNF0 438 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 GATAD1Q8WUU5 269 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 ZDHHC16Q969W1 377 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 FER1L6-AS2Q96M78 137 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 NDUFAF3Q9BU61 184 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 CXXC4Q9H2H0 198 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 FOXJ2Q9P0K8 574 aa12.51□□□□□ -0.41
SNF8-203ENST00000504000 TRGV5A0A0B4J1U4 118 aa12.5□□□□□ -0.41
SNF8-203ENST00000504000 CELA3BP08861 270 aa12.5□□□□□ -0.41
SNF8-203ENST00000504000 CNN1P51911 297 aaKnown RBP12.5□□□□□ -0.41
SNF8-203ENST00000504000 P2RY6Q15077 328 aa12.5□□□□□ -0.41
SNF8-203ENST00000504000 ALKBH6Q3KRA9 238 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms