RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 EIF5AP63241 154 aaKnown RBP9.71□□□□□ -0.86
USP46-204ENST00000503060 HOXA4Q00056 320 aaPredicted RBP9.71□□□□□ -0.86
USP46-204ENST00000503060 RPL7L1Q6DKI1 246 aaKnown RBP9.71□□□□□ -0.86
USP46-204ENST00000503060 LRP11Q86VZ4 500 aa9.71□□□□□ -0.86
USP46-204ENST00000503060 TMED6Q8WW62 240 aa9.71□□□□□ -0.86
USP46-204ENST00000503060 SNX22Q96L94 193 aa9.71□□□□□ -0.86
USP46-204ENST00000503060 TAF9BQ9HBM6 251 aa9.71□□□□□ -0.86
USP46-204ENST00000503060 ASPMQ8IZT6 3477 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.7□□□□□ -0.86
USP46-204ENST00000503060 EREGO14944 169 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 TNFSF12O43508 249 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 CRYAAP02489 173 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 CD5P06127 495 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 TESK1Q15569 626 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 TBR1Q16650 682 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 OR5D13Q8NGL4 314 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 UBALD1Q8TB05 177 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 LINC00052Q96N35 136 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 SPIN2AQ99865 258 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 SPIN2BQ9BPZ2 258 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 ELOVL1Q9BW60 279 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 FBXL17Q9UF56 701 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 DUSP13Q9UII6 198 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 RCL1Q9Y2P8 373 aaKnown RBP9.7□□□□□ -0.86
USP46-204ENST00000503060 PTPRZ1P23471 2315 aaPredicted RBP9.7□□□□□ -0.86
USP46-204ENST00000503060 GZMHP20718 246 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 F2RP25116 425 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 GLRXP35754 106 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 CD200P41217 278 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 SMIM21Q3B7S5 101 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 SLC35E4Q6ICL7 350 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 TMEM144Q7Z5S9 345 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 LRRC75A-AS1Q8N1F1 130 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 CISD2Q8N5K1 135 aaKnown RBP9.7□□□□□ -0.86
USP46-204ENST00000503060 Q8NA96 180 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 OR2Z1Q8NG97 314 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 IL22RA2Q969J5 263 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 KPTNQ9Y664 436 aa9.7□□□□□ -0.86
USP46-204ENST00000503060 NKX6-3A6NJ46 265 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 GPR137BO60478 399 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 IGHV3-13P01766 116 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 WNT2P09544 360 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 DDTP30046 118 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 P2RY1P47900 373 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 TIRAPP58753 221 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 NKX6-1P78426 367 aaPredicted RBP9.69□□□□□ -0.86
USP46-204ENST00000503060 FAM27E3Q08E93 113 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 DNLZQ5SXM8 178 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 DOLPP1Q86YN1 238 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 ZNF383Q8NA42 475 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 BEND2Q8NDZ0 799 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 DMBX1Q8NFW5 382 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 LRRC29Q8WV35 223 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 KCNIP1Q9NZI2 227 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 ARID1AO14497 2285 aa9.69□□□□□ -0.86
USP46-204ENST00000503060 KRBOX1C9JBD0 128 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 IFNL4K9M1U5 179 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 PRRG2O14669 202 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 SIVA1O15304 175 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 TFF1P04155 84 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 GAPDHP04406 335 aaKnown RBP9.68□□□□□ -0.86
USP46-204ENST00000503060 BMP5P22003 454 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 OR3A1P47881 315 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 SSBP2P81877 361 aaPredicted RBP9.68□□□□□ -0.86
USP46-204ENST00000503060 HAGHQ16775 308 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 TMEM177Q53S58 311 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 NMSQ5H8A3 153 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 LEMD1Q68G75 181 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 RNF141Q8WVD5 230 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 COQ2Q96H96 371 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 OR2V2Q96R30 315 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 SMIM3Q9BZL3 60 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 ASF1BQ9NVP2 202 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 TSSC4Q9Y5U2 329 aaPredicted RBP9.68□□□□□ -0.86
USP46-204ENST00000503060 FRYQ5TBA9 3013 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 HEATR1Q9H583 2144 aaKnown RBP9.68□□□□□ -0.86
USP46-204ENST00000503060 K7ENP7 123 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 M0QXV9 152 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 IGLV2-14P01704 120 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 FAM157CP0CG43 387 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 VDAC1P21796 283 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 NKX2-1P43699 371 aaPredicted RBP9.68□□□□□ -0.86
USP46-204ENST00000503060 KLF3P57682 345 aaPredicted RBP9.68□□□□□ -0.86
USP46-204ENST00000503060 COL10A1Q03692 680 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 AESQ08117 197 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 RAB31Q13636 194 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 OR1S2Q8NGQ3 325 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 PARP12Q9H0J9 701 aaKnown RBP9.68□□□□□ -0.86
USP46-204ENST00000503060 PIGMQ9H3S5 423 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 C11orf1Q9H5F2 150 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 METRNQ9UJH8 293 aa9.68□□□□□ -0.86
USP46-204ENST00000503060 A0A0G2JNJ9 132 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 C12orf77C9JDV5 145 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 JTBO76095 146 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 SCGB1A1P11684 91 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 GNMTQ14749 295 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 EIF5AL1Q6IS14 154 aaKnown RBP9.67□□□□□ -0.86
USP46-204ENST00000503060 OR51H1Q8NH63 302 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 OR1L1Q8NH94 360 aa9.67□□□□□ -0.86
USP46-204ENST00000503060 TMEM171Q8WVE6 324 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms