RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 OR2V2Q96R30 315 aa10□□□□□ -0.81
NUP54-202ENST00000502850 CLCC1Q96S66 551 aa10□□□□□ -0.81
NUP54-202ENST00000502850 GNG12Q9UBI6 72 aa10□□□□□ -0.81
NUP54-202ENST00000502850 COL6A6A6NMZ7 2263 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 A0A1B0GV50 99 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 C1orf196B1AJZ1 125 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 F2RL2O00254 374 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 RAMP3O60896 148 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 NDUFS6O75380 124 aaKnown RBP9.99□□□□□ -0.81
NUP54-202ENST00000502850 HPRT1P00492 218 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 SRP19P09132 144 aaKnown RBP9.99□□□□□ -0.81
NUP54-202ENST00000502850 OR13C7P0DN81 318 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 G6PCP35575 357 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 RPL30P62888 115 aaKnown RBP9.99□□□□□ -0.81
NUP54-202ENST00000502850 PMS2P11Q13670 270 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 AKIRIN2Q53H80 203 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 ZNF787Q6DD87 383 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 CENPVQ7Z7K6 275 aaPredicted RBP9.99□□□□□ -0.81
NUP54-202ENST00000502850 ZNF843Q8N446 348 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 ZNF561Q8N587 486 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 RBMXL3Q8N7X1 1067 aaKnown RBP9.99□□□□□ -0.81
NUP54-202ENST00000502850 DTD1Q8TEA8 209 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 TAF15Q92804 592 aaKnown RBP eCLIP9.99□□□□□ -0.81
NUP54-202ENST00000502850 P2RX4Q99571 388 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 NIPSNAP3BQ9BS92 247 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 METRNQ9UJH8 293 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 PSG11Q9UQ72 335 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 GAB2Q9UQC2 676 aa9.99□□□□□ -0.81
NUP54-202ENST00000502850 IGKV1D-17A0A075B6S4 117 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 UBE2L5PA0A1B0GUS4 154 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 LOC102723971A0A1B0GUV8 181 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 C17orf98A8MV24 154 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 NDUFA2O43678 99 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 CRYBA1P05813 215 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 EGR1P18146 543 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 PTAFRP25105 342 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 ERVK-16P61578 105 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 LY6DQ14210 128 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 ICAM4Q14773 271 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 HAGHQ16775 308 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 KIAA2026Q5HYC2 2103 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 SLC35E3Q7Z769 313 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 MRGPRGQ86SM5 289 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.98□□□□□ -0.81
NUP54-202ENST00000502850 NUP37Q8NFH4 326 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 OR10P1Q8NGE3 313 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 C5orf30Q96GV9 206 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 ABHD14AQ9BUJ0 271 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 FAM234AQ9H0X4 552 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 CISD1Q9NZ45 108 aaKnown RBP9.98□□□□□ -0.81
NUP54-202ENST00000502850 IL19Q9UHD0 177 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 KLF2Q9Y5W3 355 aaPredicted RBP9.98□□□□□ -0.81
NUP54-202ENST00000502850 GTF3C1Q12789 2109 aa9.98□□□□□ -0.81
NUP54-202ENST00000502850 HEATR1Q9H583 2144 aaKnown RBP9.98□□□□□ -0.81
NUP54-202ENST00000502850 A0A087WWC5 75 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 MEX3AA1L020 520 aaKnown RBP9.97□□□□□ -0.81
NUP54-202ENST00000502850 MARCH11A6NNE9 402 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 B4DEV8 164 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 C17orf112F2Z3M2 114 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 PRRG2O14669 202 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 ST8SIA5O15466 376 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 RBMXL2O75526 392 aaKnown RBP9.97□□□□□ -0.81
NUP54-202ENST00000502850 LHBP01229 141 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 IFNA4P05014 189 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 BCL2P10415 239 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 DUTP33316 252 aaKnown RBP9.97□□□□□ -0.81
NUP54-202ENST00000502850 CCL20P78556 96 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 ARL16Q0P5N6 197 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 PNRC1Q12796 327 aaPredicted RBP9.97□□□□□ -0.81
NUP54-202ENST00000502850 AARDQ4LEZ3 155 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 MORN2Q502X0 79 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 OR2B11Q5JQS5 317 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 BTNL3Q6UXE8 466 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 HAPLN4Q86UW8 402 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 MOGAT3Q86VF5 341 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 FAM222BQ8WU58 562 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 R3HDM4Q96D70 268 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 TVP23CQ96ET8 276 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 OR4C12Q96R67 309 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 DIRC2Q96SL1 478 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 RARRES2Q99969 163 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 AGMATQ9BSE5 352 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 RSG1Q9BU20 258 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 SAV1Q9H4B6 383 aaPredicted RBP9.97□□□□□ -0.81
NUP54-202ENST00000502850 RPRMQ9NS64 109 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 ELOVL5Q9NYP7 299 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 RNF7Q9UBF6 113 aa9.97□□□□□ -0.81
NUP54-202ENST00000502850 CXorf65A6NEN9 183 aa9.96□□□□□ -0.81
NUP54-202ENST00000502850 CEBPZOSA8MTT3 80 aa9.96□□□□□ -0.81
NUP54-202ENST00000502850 A8MXE2 369 aa9.96□□□□□ -0.81
NUP54-202ENST00000502850 SPRY3O43610 288 aa9.96□□□□□ -0.81
NUP54-202ENST00000502850 IRF2P14316 349 aa9.96□□□□□ -0.81
NUP54-202ENST00000502850 HOXA1P49639 335 aaPredicted RBP9.96□□□□□ -0.81
NUP54-202ENST00000502850 OR8G2PQ6IF36 304 aa9.96□□□□□ -0.81
NUP54-202ENST00000502850 RBMS3Q6XE24 437 aaKnown RBP9.96□□□□□ -0.81
NUP54-202ENST00000502850 LRP11Q86VZ4 500 aa9.96□□□□□ -0.81
NUP54-202ENST00000502850 TPRX1Q8N7U7 411 aa9.96□□□□□ -0.81
NUP54-202ENST00000502850 ZNF709Q8N972 641 aa9.96□□□□□ -0.81
NUP54-202ENST00000502850 OR52E5Q8NH55 327 aa9.96□□□□□ -0.81
NUP54-202ENST00000502850 Q8TCH9 128 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms