RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 H2BFMP0C1H6 154 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 TMEM225BP0DP42 221 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 PNMTP11086 282 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 AZU1P20160 251 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 CBLN1P23435 193 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 RAB9AP51151 201 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 ARG2P78540 354 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 EWSR1Q01844 656 aaKnown RBP eCLIP4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 RBPJQ06330 500 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 PNRC1Q12796 327 aaPredicted RBP4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 SCGB2A2Q13296 93 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZNF141Q15928 474 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 CXorf66Q5JRM2 361 aaPredicted RBP4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 FAM220AQ7Z4H9 259 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZNF440Q8IYI8 595 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZNF114Q8NC26 417 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 FAM110AQ9BQ89 295 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 ELOVL3Q9HB03 270 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 MED29Q9NX70 200 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 CENPEQ02224 2701 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 DNAJC13O75165 2243 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZNF407Q9C0G0 2248 aa4.92□□□□□ -1.62
SOX2-OT-218ENST00000498731 CGB1A6NKQ9 187 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZNF785A8K8V0 405 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 NPIPA5E9PKD4 350 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 H3BP45 60 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 QRFPP83859 136 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 PSG9Q00887 426 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZNF841Q6ZN19 808 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 FBXL14Q8N1E6 418 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 OR52L2PQ8NGH6 319 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 KRTAP3-3Q9BYR6 98 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 KRTAP3-2Q9BYR7 98 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 NPIPA1Q9UND3 350 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 MUC21A0A0G2JKD1 596 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 MUC21A0A140T8X8 626 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 CEBPZOSA8MTT3 80 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 SERPINE3A8MV23 424 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 DIRC3C9JPN6 131 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 CCL2P13500 99 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 IGFBP3P17936 291 aaPredicted RBP4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 RPS4Y1P22090 263 aaKnown RBP4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZNF154Q13106 437 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 CEACAM21Q3KPI0 293 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 MUC21Q5SSG8 566 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 SAMD13Q5VXD3 122 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 KCTD18Q6PI47 426 aaPredicted RBP4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 CDC20BQ86Y33 519 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 BOD1L2Q8IYS8 172 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 KIR3DL3Q8N743 410 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 TNRC6AQ8NDV7 1962 aaKnown RBP4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 STARD4Q96DR4 205 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 ARHGAP5-AS1Q96IT6 56 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 PTPRQQ9UMZ3 2332 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 WIPI2Q9Y4P8 454 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 TRAPPC1Q9Y5R8 145 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 IGHV3-15A0A0B4J1V0 119 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 TRAV25A0A0B4J276 109 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 MAP1LC3B2A6NCE7 125 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 BGLAPP02818 100 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZNF823P16415 610 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 FSTP19883 344 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 NPPCP23582 126 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 FOLR3P41439 243 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 SLC6A8P48029 635 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 SSBP1Q04837 148 aaKnown RBP4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZNF74Q16587 644 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 ABHD17BQ5VST6 288 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 C1orf140Q5VVS0 124 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 MRPL52Q86TS9 123 aaKnown RBP4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 LHFPL1Q86WI0 220 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 C1orf174Q8IYL3 243 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZIC4Q8N9L1 334 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 OR5C1Q8NGR4 320 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 OR1B1Q8NGR6 318 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 FNDC9Q8TBE3 224 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 DERL1Q9BUN8 251 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 MAP1LC3BQ9GZQ8 125 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 RPRMQ9NS64 109 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 TMEM242Q9NWH2 141 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 ALKBH4Q9NXW9 302 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 PRSS50Q9UI38 385 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 LOXL2Q9Y4K0 774 aa4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 TLN1Q9Y490 2541 aaKnown RBP4.91□□□□□ -1.62
SOX2-OT-218ENST00000498731 NCOA6Q14686 2063 aaPredicted RBP4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 FBLL1A6NHQ2 334 aaKnown RBP4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 B4DEV8 164 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 G3V4G9 280 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 IGKV3-11P04433 115 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 HLA-DOBP13765 273 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 CEBPDP49716 269 aaPredicted RBP4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 DYNLT3P51808 116 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 IGLV3-21P80748 117 aaPredicted RBP4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 MRPS34P82930 218 aaKnown RBP4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 IL13RA2Q14627 380 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 TESK1Q15569 626 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 ACKR1Q16570 336 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 DCAF12Q5T6F0 453 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 NIT1Q86X76 327 aa4.9□□□□□ -1.62
SOX2-OT-218ENST00000498731 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms