RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 M0R381 172 aa1.75□□□□□ -2.13
SMC4-225ENST00000497203 CCL3P10147 92 aa1.75□□□□□ -2.13
SMC4-225ENST00000497203 CD36P16671 472 aa1.75□□□□□ -2.13
SMC4-225ENST00000497203 MLLT11Q13015 90 aaPredicted RBP1.75□□□□□ -2.13
SMC4-225ENST00000497203 KRTAP6-3Q3LI67 103 aa1.75□□□□□ -2.13
SMC4-225ENST00000497203 SLC51BQ86UW2 128 aa1.75□□□□□ -2.13
SMC4-225ENST00000497203 NAA40Q86UY6 237 aa1.75□□□□□ -2.13
SMC4-225ENST00000497203 IQCF2Q8IXL9 164 aa1.75□□□□□ -2.13
SMC4-225ENST00000497203 TMEM156Q8N614 296 aa1.75□□□□□ -2.13
SMC4-225ENST00000497203 PIGXQ8TBF5 258 aa1.75□□□□□ -2.13
SMC4-225ENST00000497203 ANKRD36BP1Q96IX9 119 aa1.75□□□□□ -2.13
SMC4-225ENST00000497203 C16orf95Q9H693 158 aa1.75□□□□□ -2.13
SMC4-225ENST00000497203 POLR1DQ9Y2S0 133 aa1.75□□□□□ -2.13
SMC4-225ENST00000497203 DICER1Q9UPY3 1922 aaKnown RBP1.75□□□□□ -2.13
SMC4-225ENST00000497203 THSD7AQ9UPZ6 1657 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 CHD5Q8TDI0 1954 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 NAV1Q8NEY1 1877 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 OR11H12B2RN74 326 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 IGHV1-69P01742 117 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 TYMSP04818 313 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 IL3P08700 152 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 CRYBB3P26998 211 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 BLVRAP53004 296 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 GNA12Q03113 381 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 FOXF1Q12946 379 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 UAP1Q16222 522 aaPredicted RBP1.74□□□□□ -2.13
SMC4-225ENST00000497203 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.74□□□□□ -2.13
SMC4-225ENST00000497203 C1orf174Q8IYL3 243 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 LRRC34Q8IZ02 419 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 OR11H2Q8NH07 326 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 DDI1Q8WTU0 396 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 MAP1LC3AQ9H492 121 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 NOSIPQ9Y314 301 aaKnown RBP1.74□□□□□ -2.13
SMC4-225ENST00000497203 DSCAMO60469 2012 aa1.74□□□□□ -2.13
SMC4-225ENST00000497203 CACNA1GO43497 2377 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 MPDZO75970 2070 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 ICE1Q9Y2F5 2266 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 SLIT2O94813 1529 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 A0A1W2PQL4 384 aaPredicted RBP1.73□□□□□ -2.13
SMC4-225ENST00000497203 OR5K4A6NMS3 321 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 LRRN3E7EW58 273 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 H0Y980 276 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 HLA-DRAP01903 254 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 KRT7P08729 469 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 MAGOHP61326 146 aaKnown RBP1.73□□□□□ -2.13
SMC4-225ENST00000497203 PPP1R1AQ13522 171 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 JOSD1Q15040 202 aaPredicted RBP1.73□□□□□ -2.13
SMC4-225ENST00000497203 PLPPR5Q32ZL2 321 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 TMEM31Q5JXX7 168 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 LRRN1Q6UXK5 716 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 EEF1AKMT1Q8WVE0 214 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 C12orf43Q96C57 262 aaKnown RBP1.73□□□□□ -2.13
SMC4-225ENST00000497203 MRPS24Q96EL2 167 aaKnown RBP1.73□□□□□ -2.13
SMC4-225ENST00000497203 TMA16Q96EY4 203 aaKnown RBP1.73□□□□□ -2.13
SMC4-225ENST00000497203 ARL5BQ96KC2 179 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 SLC35G5Q96KT7 338 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 MIEN1Q9BRT3 115 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 TMEM109Q9BVC6 243 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 TMEM222Q9H0R3 208 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 TMEM106BQ9NUM4 274 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 DKKL1Q9UK85 242 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 ARHGAP32A7KAX9 2087 aa1.73□□□□□ -2.13
SMC4-225ENST00000497203 IGHV3-15A0A0B4J1V0 119 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 MUC21A0A0G2JKD1 596 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 MUC21A0A140T8X8 626 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 OR6C6A6NF89 314 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 FNDC10F2Z333 226 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 CXCR6O00574 342 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 ZNF189O75820 626 aaPredicted RBP1.72□□□□□ -2.13
SMC4-225ENST00000497203 HLA-DQB2P05538 268 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 MYL12AP19105 171 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 CD24P25063 80 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 SERPINB10P48595 397 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 TAS2R30P59541 319 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 BATFQ16520 125 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 FAM78BQ5VT40 261 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 C2orf91Q6ZV80 131 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 COMMD7Q86VX2 200 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 UBL4BQ8N7F7 174 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 CNEP1R1Q8N9A8 125 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 HAVCR2Q8TDQ0 301 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 ZNF471Q9BX82 626 aaPredicted RBP1.72□□□□□ -2.13
SMC4-225ENST00000497203 FKBP14Q9NWM8 211 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 NDUFB11Q9NX14 153 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 BABAM2Q9NXR7 383 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 KLK5Q9Y337 293 aaPredicted RBP1.72□□□□□ -2.13
SMC4-225ENST00000497203 POLR3HQ9Y535 204 aaPredicted RBP1.72□□□□□ -2.13
SMC4-225ENST00000497203 MAP3K5Q99683 1374 aa1.72□□□□□ -2.13
SMC4-225ENST00000497203 A0A1B0GW54 56 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 C2orf74A8MZ97 194 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 GNRH2O43555 120 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 UCHL1P09936 223 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 P0DMU3 169 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 FAM231AP0DMU4 169 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 FAM231CP0DMU5 169 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 RPL12P30050 165 aaKnown RBP1.71□□□□□ -2.14
SMC4-225ENST00000497203 RPL27AP46776 148 aaKnown RBP1.71□□□□□ -2.14
SMC4-225ENST00000497203 GABRA2P47869 451 aa1.71□□□□□ -2.14
SMC4-225ENST00000497203 XCL1P47992 114 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms