RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 LY96Q9Y6Y9 160 aa7.71□□□□□ -1.18
HPS4-217ENST00000496385 TRAV34A0A0B4J273 112 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 TGFBR3LH3BV60 316 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 FCN1O00602 326 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 PAGE4O60829 102 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 CLPSP04118 112 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 HLA-DOBP13765 273 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 COX5AP20674 150 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 SRD5A2P31213 254 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 TMEM267Q0VDI3 215 aaPredicted RBP7.7□□□□□ -1.18
HPS4-217ENST00000496385 DCAF12Q5T6F0 453 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 GUSBP11Q6P575 273 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 OR4C12Q96R67 309 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 PEF1Q9UBV8 284 aaKnown RBP7.7□□□□□ -1.18
HPS4-217ENST00000496385 AKAP13Q12802 2813 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 A0A1B0GV72 72 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 A0A1W2PS18 150 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 LRP5LA4QPB2 252 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 H0YJW9 148 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 HCRTR1O43613 425 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 OR7C2O60412 319 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 CBLN1P23435 193 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 NPPCP23582 126 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 TIMP3P35625 211 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 SLC37A2Q8TED4 501 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 FAM103A1Q9BTL3 118 aaKnown RBP7.7□□□□□ -1.18
HPS4-217ENST00000496385 GNB4Q9HAV0 340 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 STARD5Q9NSY2 213 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 IL36GQ9NZH8 169 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 RNF114Q9Y508 228 aa7.7□□□□□ -1.18
HPS4-217ENST00000496385 PHF3Q92576 2039 aaKnown RBP7.7□□□□□ -1.18
HPS4-217ENST00000496385 LY6G6EA0A0G2JKS1 128 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 IGKV1D-33P01593 117 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 IGKV1-33P01594 117 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 CEACAM3P40198 252 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 LGALS4P56470 323 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 CFAP161Q6P656 301 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 SCCPDHQ8NBX0 429 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 OR10G9Q8NGN4 311 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 OR10G7Q8NGN6 311 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 THAP3Q8WTV1 239 aaPredicted RBP7.69□□□□□ -1.18
HPS4-217ENST00000496385 OR6C1Q96RD1 312 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 PNRC2Q9NPJ4 139 aaKnown RBP7.69□□□□□ -1.18
HPS4-217ENST00000496385 U3KQA8 63 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 UNC13CQ8NB66 2214 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 FAM90A26D6RGX4 464 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 PDCD6O75340 191 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 SMIM17P0DL12 118 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 REG1BP48304 166 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 TRIP6Q15654 476 aaKnown RBP7.69□□□□□ -1.18
HPS4-217ENST00000496385 RNFT1Q5M7Z0 435 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 SHISA5Q8N114 240 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 RAB1CQ92928 201 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 TMEM204Q9BSN7 226 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 ST20Q9HBF5 79 aa7.69□□□□□ -1.18
HPS4-217ENST00000496385 A0A0J9YY10 115 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 M0R1X1 148 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 C1QTNF9P0C862 333 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 LINC00869P0C866 280 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 GFRA1P56159 465 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 GNB1P62873 340 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 ARL16Q0P5N6 197 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 MALLQ13021 153 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 ZNF324BQ6AW86 544 aaPredicted RBP7.68□□□□□ -1.18
HPS4-217ENST00000496385 AMMECR1LQ6DCA0 310 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 FAM58AQ8N1B3 248 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 FER1L6-AS1Q8NA97 138 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 TMEM186Q96B77 213 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 KLHDC3Q9BQ90 382 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 QTRT1Q9BXR0 403 aaKnown RBP7.68□□□□□ -1.18
HPS4-217ENST00000496385 SLC7A10Q9NS82 523 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 SNURFLB1AK76 121 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 C1QTNF9BB2RNN3 333 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 TM4SF5O14894 197 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 TUSC2O75896 110 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 CA2P00918 260 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 IGLC1P0CG04 106 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 ZNF883P0CG24 379 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 ZNF83P51522 516 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 SELENOVP59797 346 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 RPS18P62269 152 aaKnown RBP7.68□□□□□ -1.18
HPS4-217ENST00000496385 POU3F1Q03052 451 aaPredicted RBP7.68□□□□□ -1.18
HPS4-217ENST00000496385 SLC38A11Q08AI6 406 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 SAMD13Q5VXD3 122 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 ZNF818PQ6ZRF7 136 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 GTF2H5Q6ZYL4 71 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 HAPLN4Q86UW8 402 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 GAPTQ8N292 157 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 OR10G3Q8NGC4 313 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 LIN37Q96GY3 246 aaPredicted RBP7.68□□□□□ -1.18
HPS4-217ENST00000496385 NXF5Q9H1B4 397 aaKnown RBP7.68□□□□□ -1.18
HPS4-217ENST00000496385 C1RLQ9NZP8 487 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 CEP295Q9C0D2 2601 aa7.68□□□□□ -1.18
HPS4-217ENST00000496385 NCOR2Q9Y618 2525 aa7.67□□□□□ -1.18
HPS4-217ENST00000496385 H3BP45 60 aa7.67□□□□□ -1.18
HPS4-217ENST00000496385 HLA-DRB1P01911 266 aa7.67□□□□□ -1.18
HPS4-217ENST00000496385 ANOS1P23352 680 aa7.67□□□□□ -1.18
HPS4-217ENST00000496385 F2RP25116 425 aa7.67□□□□□ -1.18
HPS4-217ENST00000496385 LGALS7P47929 136 aa7.67□□□□□ -1.18
HPS4-217ENST00000496385 HHEXQ03014 270 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms