RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 FAM19A1Q7Z5A9 133 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 GKN2Q86XP6 184 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 ZDHHC22Q8N966 263 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 SLC26A10Q8NG04 563 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 OR4K17Q8NGC6 315 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 OR2AE1Q8NHA4 323 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 RNASEH2CQ8TDP1 164 aaKnown RBP2.23□□□□□ -2.05
SMC4-224ENST00000494612 OR2M4Q96R27 311 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 DDA1Q9BW61 102 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 TCEAL2Q9H3H9 227 aaPredicted RBP2.23□□□□□ -2.05
SMC4-224ENST00000494612 RDH14Q9HBH5 336 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 ABCB9Q9NP78 766 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 C1orf109Q9NX04 203 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 NKIRAS1Q9NYS0 192 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 PSMD13Q9UNM6 376 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 KLF13Q9Y2Y9 288 aaPredicted RBP2.23□□□□□ -2.05
SMC4-224ENST00000494612 ZNF706Q9Y5V0 76 aaPredicted RBP2.23□□□□□ -2.05
SMC4-224ENST00000494612 PUS1Q9Y606 427 aaKnown RBP eCLIP2.23□□□□□ -2.05
SMC4-224ENST00000494612 DNHD1Q96M86 4753 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 DOPEY1Q5JWR5 2465 aa2.23□□□□□ -2.05
SMC4-224ENST00000494612 ICE1Q9Y2F5 2266 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 CREBBPQ92793 2442 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 CSMD2Q7Z408 3487 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 LRBAP50851 2863 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 SDK2Q58EX2 2172 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 KNL1Q8NG31 2342 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 IGKV2-24A0A0C4DH68 120 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 A0A1B0GTI1 187 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 A0A1W2PNN7 141 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 IZUMO1RA6ND01 250 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 ITGB1BP1O14713 200 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 CDIPTO14735 213 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 FABP7O15540 132 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 ADAP1O75689 374 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 ASS1P00966 412 aaKnown RBP2.22□□□□□ -2.05
SMC4-224ENST00000494612 TNFP01375 233 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 IGLV3-27P01718 113 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 IGHV1-46P01743 117 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 HLA-DRAP01903 254 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 RLN2P04090 185 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 ZNF35P13682 527 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 RAB38P57729 211 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 RHOAP61586 193 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 SNRPFP62306 86 aaKnown RBP2.22□□□□□ -2.05
SMC4-224ENST00000494612 ZNHIT3Q15649 155 aaPredicted RBP2.22□□□□□ -2.05
SMC4-224ENST00000494612 TOMM34Q15785 309 aaPredicted RBP2.22□□□□□ -2.05
SMC4-224ENST00000494612 ACTBL2Q562R1 376 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 SPIN3Q5JUX0 258 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 MRPL52Q86TS9 123 aaKnown RBP2.22□□□□□ -2.05
SMC4-224ENST00000494612 FUNDC1Q8IVP5 155 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 GAPTQ8N292 157 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 RNF10Q8N5U6 811 aaKnown RBP2.22□□□□□ -2.05
SMC4-224ENST00000494612 UBA3Q8TBC4 463 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 NELFBQ8WX92 580 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 RORBQ92753 470 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 TNFRSF14Q92956 283 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 SHCBP1LQ9BZQ2 653 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 MRPL40Q9NQ50 206 aaKnown RBP2.22□□□□□ -2.05
SMC4-224ENST00000494612 C12orf4Q9NQ89 552 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 TMEM38BQ9NVV0 291 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 RBM22Q9NW64 420 aaKnown RBP eCLIP2.22□□□□□ -2.05
SMC4-224ENST00000494612 TFR2Q9UP52 801 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 USH1CQ9Y6N9 552 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 OTOGQ6ZRI0 2925 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 ADGRG4Q8IZF6 3080 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 CELSR1Q9NYQ6 3014 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 RP1P56715 2156 aa2.22□□□□□ -2.05
SMC4-224ENST00000494612 TNRC6AQ8NDV7 1962 aaKnown RBP2.21□□□□□ -2.05
SMC4-224ENST00000494612 CHD5Q8TDI0 1954 aa2.21□□□□□ -2.05
SMC4-224ENST00000494612 USP9YO00507 2555 aaPredicted RBP2.21□□□□□ -2.06
SMC4-224ENST00000494612 IGKV3D-11A0A0A0MRZ8 115 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 A0A1B0GX12 115 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 GOLGA6L10A6NI86 522 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 M0QYV0 167 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 UBDO15205 165 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 RGS5O15539 181 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 PSIP1O75475 530 aaKnown RBP2.21□□□□□ -2.06
SMC4-224ENST00000494612 OR2A4O95047 310 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 COX6B1P14854 86 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 TAC1P20366 129 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 PVALBP20472 110 aaPredicted RBP2.21□□□□□ -2.06
SMC4-224ENST00000494612 GCLMP48507 274 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 TTPAP49638 278 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 OR10A3P58181 314 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 CD164Q04900 197 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 SPTAN1Q13813 2472 aaKnown RBP2.21□□□□□ -2.06
SMC4-224ENST00000494612 CEACAM21Q3KPI0 293 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 KCTD16Q68DU8 428 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 C22orf39Q6P5X5 142 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 ZNF773Q6PK81 442 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 FAM231DQ6ZW35 169 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 ADM2Q7Z4H4 148 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 TAC4Q86UU9 113 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 C10orf107Q8IVU9 208 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 SPICQ8N5J4 248 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 LINC00337Q8N6G1 96 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 QKIQ96PU8 341 aaKnown RBP eCLIP2.21□□□□□ -2.061e-6■■■■■ 35
SMC4-224ENST00000494612 SPACA5Q96QH8 159 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 OR2A7Q96R45 310 aa2.21□□□□□ -2.06
SMC4-224ENST00000494612 KLF6Q99612 283 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms