RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 CFHR4Q92496 578 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 AKR1E2Q96JD6 320 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 RSRP1Q9BUV0 290 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 SLC35D1Q9NTN3 355 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 SLC2A8Q9NY64 477 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 COPZ2Q9P299 210 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 GAB2Q9UQC2 676 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 SVEP1Q4LDE5 3571 aa12.66□□□□□ -0.38
HPS4-216ENST00000493455 H0YJW9 148 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 TCF21O43680 179 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 FCGR3BO75015 233 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 VENTXO95231 258 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 ECI1P42126 302 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 UCP3P55916 312 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 PIGPP57054 158 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 CATR1Q13166 79 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 MZT2BQ6NZ67 158 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 LURAP1LQ8IV03 231 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 POC5Q8NA72 575 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 ZBTB34Q8NCN2 500 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 HSD17B10Q99714 261 aaKnown RBP12.65□□□□□ -0.38
HPS4-216ENST00000493455 ESM1Q9NQ30 184 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 SLC2A9Q9NRM0 540 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 VSIG4Q9Y279 399 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 WASHC3Q9Y3C0 194 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 MXRA5Q9NR99 2828 aa12.65□□□□□ -0.38
HPS4-216ENST00000493455 VGLL3A8MV65 326 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 PGLYRP1O75594 196 aaPredicted RBP12.64□□□□□ -0.39
HPS4-216ENST00000493455 CTSDP07339 412 aaPredicted RBP12.64□□□□□ -0.39
HPS4-216ENST00000493455 FAM106CPP0CH98 169 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 BTCP35070 178 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 DEFA1P59665 94 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 DEFA3P59666 94 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 CBX3Q13185 183 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 ASAH1Q13510 395 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 RBMS2Q15434 407 aaKnown RBP12.64□□□□□ -0.39
HPS4-216ENST00000493455 SLC9A3R2Q15599 337 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 RTL8BQ17RB0 113 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 ZNF66Q6ZN08 573 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 TBC1D26Q86UD7 250 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 OR5R1Q8NH85 324 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 PIFOQ8TCI5 191 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 ADTRPQ96IZ2 230 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 SCGB3A2Q96PL1 93 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 CHIAQ9BZP6 476 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 TCF19Q9Y242 345 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 PRELID3BQ9Y3B1 194 aa12.64□□□□□ -0.39
HPS4-216ENST00000493455 TEX13DA0A0J9YY54 714 aaPredicted RBP12.63□□□□□ -0.39
HPS4-216ENST00000493455 FAM240BA0A1B0GVZ2 78 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 RNF212BA8MTL3 300 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 CRYZL1O95825 349 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 MOSP00540 346 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 IFNA2P01563 188 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 AKR1C4P17516 323 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 CD1BP29016 333 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 HILS1P60008 231 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 RPS16P62249 146 aaKnown RBP12.63□□□□□ -0.39
HPS4-216ENST00000493455 MSMO1Q15800 293 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 ZDHHC22Q8N966 263 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 CCDC71LQ8N9Z2 235 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 ADAD2Q8NCV1 583 aaKnown RBP12.63□□□□□ -0.39
HPS4-216ENST00000493455 OR2T10Q8NGZ9 312 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 ENKURQ8TC29 256 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 EAF1Q96JC9 268 aaPredicted RBP12.63□□□□□ -0.39
HPS4-216ENST00000493455 JMJD8Q96S16 334 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 PRDM13Q9H4Q3 707 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 VPREB3Q9UKI3 123 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 GPR132Q9UNW8 380 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 FLVCR2Q9UPI3 526 aa12.63□□□□□ -0.39
HPS4-216ENST00000493455 TRAV6A0A075B6T7 132 aa12.62□□□□□ -0.39
HPS4-216ENST00000493455 NCBP2LA6PVI3 153 aaKnown RBP12.62□□□□□ -0.39
HPS4-216ENST00000493455 ARPC1BO15143 372 aaKnown RBP12.62□□□□□ -0.39
HPS4-216ENST00000493455 CNTFRP26992 372 aa12.62□□□□□ -0.39
HPS4-216ENST00000493455 MC5RP33032 325 aa12.62□□□□□ -0.39
HPS4-216ENST00000493455 DYNLT3P51808 116 aa12.62□□□□□ -0.39
HPS4-216ENST00000493455 EIF4EBP1Q13541 118 aaPredicted RBP12.62□□□□□ -0.39
HPS4-216ENST00000493455 SURF2Q15527 256 aaPredicted RBP12.62□□□□□ -0.39
HPS4-216ENST00000493455 AANATQ16613 207 aa12.62□□□□□ -0.39
HPS4-216ENST00000493455 CCBE1Q6UXH8 406 aaPredicted RBP12.62□□□□□ -0.39
HPS4-216ENST00000493455 PDPNQ86YL7 162 aa12.62□□□□□ -0.39
HPS4-216ENST00000493455 SPAG16Q8N0X2 631 aa12.62□□□□□ -0.39
HPS4-216ENST00000493455 OR5AN1Q8NGI8 311 aa12.62□□□□□ -0.39
HPS4-216ENST00000493455 ZNF486Q96H40 463 aaPredicted RBP12.62□□□□□ -0.39
HPS4-216ENST00000493455 RTBDNQ9BSG5 229 aaPredicted RBP12.62□□□□□ -0.39
HPS4-216ENST00000493455 SLC25A33Q9BSK2 321 aa12.62□□□□□ -0.39
HPS4-216ENST00000493455 C5orf66Q9H5L9 145 aa12.62□□□□□ -0.39
HPS4-216ENST00000493455 BEX1Q9HBH7 125 aa12.62□□□□□ -0.39
HPS4-216ENST00000493455 PITPNC1Q9UKF7 332 aa12.62□□□□□ -0.39
HPS4-216ENST00000493455 A6NDX4 124 aa12.61□□□□□ -0.39
HPS4-216ENST00000493455 SHOXO15266 292 aa12.61□□□□□ -0.39
HPS4-216ENST00000493455 MPPED1O15442 326 aa12.61□□□□□ -0.39
HPS4-216ENST00000493455 NDUFB6O95139 128 aa12.61□□□□□ -0.39
HPS4-216ENST00000493455 IGKV1-16P04430 117 aa12.61□□□□□ -0.39
HPS4-216ENST00000493455 HABP2Q14520 560 aaPredicted RBP12.61□□□□□ -0.39
HPS4-216ENST00000493455 MMDQ15546 238 aa12.61□□□□□ -0.39
HPS4-216ENST00000493455 DDB2Q92466 427 aa12.61□□□□□ -0.39
HPS4-216ENST00000493455 FLYWCH2Q96CP2 140 aaKnown RBP12.61□□□□□ -0.39
HPS4-216ENST00000493455 RITA1Q96K30 269 aa12.61□□□□□ -0.39
HPS4-216ENST00000493455 HARBI1Q96MB7 349 aa12.61□□□□□ -0.39
HPS4-216ENST00000493455 SLC25A21Q9BQT8 299 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms