RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 SLC25A24Q6NUK1 477 aa10.77□□□□□ -0.69
PRAME-213ENST00000492657 BHLHA15Q7RTS1 189 aaPredicted RBP10.77□□□□□ -0.69
PRAME-213ENST00000492657 THNSL2Q86YJ6 484 aa10.77□□□□□ -0.69
PRAME-213ENST00000492657 C1orf162Q8NEQ5 155 aaPredicted RBP10.77□□□□□ -0.69
PRAME-213ENST00000492657 PLPPR2Q96GM1 343 aa10.77□□□□□ -0.69
PRAME-213ENST00000492657 YPEL4Q96NS1 127 aa10.77□□□□□ -0.69
PRAME-213ENST00000492657 DUSP13Q9UII6 198 aa10.77□□□□□ -0.69
PRAME-213ENST00000492657 C1QTNF9BB2RNN3 333 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 SYNGR2O43760 224 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 TRGC1P0CF51 173 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 KITLGP21583 273 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 GCH1P30793 250 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 RPL23AP62750 156 aaKnown RBP10.76□□□□□ -0.69
PRAME-213ENST00000492657 BAXQ07812 192 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 ZNF816Q0VGE8 651 aaPredicted RBP10.76□□□□□ -0.69
PRAME-213ENST00000492657 LTC4SQ16873 150 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 HAPLN4Q86UW8 402 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 FGFRL1Q8N441 504 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 ZADH2Q8N4Q0 377 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 ABHD5Q8WTS1 349 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 GALMQ96C23 342 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 ATP5SQ99766 215 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 SSX3Q99909 188 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 ADGRG4Q8IZF6 3080 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 A0A1B0GW64 132 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 PPP1R2P9O14990 202 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 EGR1P18146 543 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 SSX2Q16385 188 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 CD177Q8N6Q3 437 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 OR2Z1Q8NG97 314 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 OR13A1Q8NGR1 328 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 LRRC29Q8WV35 223 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 LSM10Q969L4 123 aaKnown RBP10.76□□□□□ -0.69
PRAME-213ENST00000492657 GNPNAT1Q96EK6 184 aaPredicted RBP10.76□□□□□ -0.69
PRAME-213ENST00000492657 WFIKKN1Q96NZ8 548 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 RSG1Q9BU20 258 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 PSENENQ9NZ42 101 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 KIAA1456Q9P272 454 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 OR5H1A6NKK0 313 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 CEACAM4O75871 244 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 SCAF4O95104 1147 aaKnown RBP10.76□□□□□ -0.69
PRAME-213ENST00000492657 KRASP01116 189 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 SRP19P09132 144 aaKnown RBP10.76□□□□□ -0.69
PRAME-213ENST00000492657 NKX6-1P78426 367 aaPredicted RBP10.76□□□□□ -0.69
PRAME-213ENST00000492657 EDDM3AQ14507 147 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 SLC35E4Q6ICL7 350 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 ZNF429Q86V71 674 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 STX12Q86Y82 276 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 HIST3H2BBQ8N257 126 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 SNIP1Q8TAD8 396 aaKnown RBP10.76□□□□□ -0.69
PRAME-213ENST00000492657 RAB40CQ96S21 281 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 LIN7CQ9NUP9 197 aaKnown RBP10.76□□□□□ -0.69
PRAME-213ENST00000492657 WASF3Q9UPY6 502 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 WSB1Q9Y6I7 421 aa10.76□□□□□ -0.69
PRAME-213ENST00000492657 ZNF891A8MT65 544 aaPredicted RBP10.75□□□□□ -0.69
PRAME-213ENST00000492657 SLC25A6P12236 298 aa10.75□□□□□ -0.69
PRAME-213ENST00000492657 G6PCP35575 357 aa10.75□□□□□ -0.69
PRAME-213ENST00000492657 BRWD1-AS2P59051 145 aa10.75□□□□□ -0.69
PRAME-213ENST00000492657 VHLLQ6RSH7 139 aa10.75□□□□□ -0.69
PRAME-213ENST00000492657 ZNF474Q6S9Z5 364 aaPredicted RBP10.75□□□□□ -0.69
PRAME-213ENST00000492657 SLC25A15Q9Y619 301 aa10.75□□□□□ -0.69
PRAME-213ENST00000492657 KALRNO60229 2985 aa10.75□□□□□ -0.69
PRAME-213ENST00000492657 C17orf98A8MV24 154 aa10.75□□□□□ -0.69
PRAME-213ENST00000492657 SLC31A2O15432 143 aa10.75□□□□□ -0.69
PRAME-213ENST00000492657 SSTP61278 116 aa10.75□□□□□ -0.69
PRAME-213ENST00000492657 ICAM4Q14773 271 aa10.75□□□□□ -0.69
PRAME-213ENST00000492657 SPANXN5Q5MJ07 72 aa10.75□□□□□ -0.69
PRAME-213ENST00000492657 SMDT1Q9H4I9 107 aa10.75□□□□□ -0.69
PRAME-213ENST00000492657 VSIRQ9H7M9 311 aa10.75□□□□□ -0.69
PRAME-213ENST00000492657 IGHV3OR15-7A0A075B7D8 119 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 OOEPA6NGQ2 149 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 WNT2P09544 360 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 TAS2R30P59541 319 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 RPS16P62249 146 aaKnown RBP10.74□□□□□ -0.69
PRAME-213ENST00000492657 ZNF645Q8N7E2 425 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 MALSU1Q96EH3 234 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 FAM215AQ9Y5M1 114 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 DCHS1Q96JQ0 3298 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 BSNQ9UPA5 3926 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 ZNF705GA8MUZ8 300 aaPredicted RBP10.74□□□□□ -0.69
PRAME-213ENST00000492657 SEC14L6B5MCN3 397 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 M0R1B8 84 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 S1PR2O95136 353 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 IGHV3-13P01766 116 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 IGHV3-7P01780 117 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 TLE4Q04727 773 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 TCF15Q12870 199 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 NECAP1Q8NC96 275 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 PACRGQ96M98 296 aaPredicted RBP10.74□□□□□ -0.69
PRAME-213ENST00000492657 GNG13Q9P2W3 67 aa10.74□□□□□ -0.69
PRAME-213ENST00000492657 DSCAMO60469 2012 aa10.73□□□□□ -0.69
PRAME-213ENST00000492657 P2RY6Q15077 328 aa10.73□□□□□ -0.69
PRAME-213ENST00000492657 WDR25Q64LD2 544 aaPredicted RBP10.73□□□□□ -0.69
PRAME-213ENST00000492657 MBD3L4A6NDZ8 208 aaPredicted RBP10.73□□□□□ -0.69
PRAME-213ENST00000492657 MBD3L3A6NE82 208 aaPredicted RBP10.73□□□□□ -0.69
PRAME-213ENST00000492657 MBD3L5A6NJ08 208 aaPredicted RBP10.73□□□□□ -0.69
PRAME-213ENST00000492657 EREGO14944 169 aa10.73□□□□□ -0.69
PRAME-213ENST00000492657 IFNA5P01569 189 aa10.73□□□□□ -0.69
PRAME-213ENST00000492657 CD55P08174 381 aa10.73□□□□□ -0.69
PRAME-213ENST00000492657 PRDX2P32119 198 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms