RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 A0A1W2PN81 502 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 A8MZ25 164 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 LINC01619G3V211 115 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 H3BUA1 57 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 H7C2Y5 167 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 FABP7O15540 132 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 FCGR3AP08637 254 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 GSTP1P09211 210 aaKnown RBP6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 HSMCR30P0CW71 290 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 CHRNA7P36544 502 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 MAP2K4P45985 399 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 TAGLNQ01995 201 aaKnown RBP6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 ECSCRQ19T08 205 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 MOGAT2Q3SYC2 334 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 ACTBL2Q562R1 376 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 NR2C2APQ86WQ0 139 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 LFNGQ8NES3 379 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 SETD6Q8TBK2 473 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 DDB2Q92466 427 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 FLYWCH2Q96CP2 140 aaKnown RBP6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 C5orf30Q96GV9 206 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 TMEM68Q96MH6 324 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 OR5B12Q96R08 314 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 NDUFB11Q9NX14 153 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 SDHAF2Q9NX18 166 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 ZNF221Q9UK13 617 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 SMAD5-AS1Q9Y6J3 95 aa6.44□□□□□ -1.38
SMARCB1-207ENST00000491967 HUWE1Q7Z6Z7 4374 aaKnown RBP6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 SRRM4A7MD48 611 aaKnown RBP6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 HSPA12AO43301 675 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 MRPS14O60783 128 aaKnown RBP6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 ATP6V1G2O95670 118 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 CA2P00918 260 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 OR8U9P0C7N5 309 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 GSTT2P0CG29 244 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 GSTT2BP0CG30 244 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 HIST1H1DP16402 221 aaKnown RBP6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 SLURP1P55000 103 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 OR10A3P58181 314 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 RPS16P62249 146 aaKnown RBP6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 PJVKQ0ZLH3 352 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 KLF5Q13887 457 aaPredicted RBP6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 FXYD3Q14802 87 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 TMEM177Q53S58 311 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 IGSF11Q5DX21 431 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 UNQ5815/PRO19632Q6UWF5 114 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 IL34Q6ZMJ4 242 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 ZNF367Q7RTV3 350 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 H1FOOQ8IZA3 346 aaPredicted RBP6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 Q8N1Y9 231 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 OR10R2Q8NGX6 335 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 CASTOR1Q8WTX7 329 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 ARPC1AQ92747 370 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 RAB3CQ96E17 227 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 FAM103A1Q9BTL3 118 aaKnown RBP6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 CENPOQ9BU64 300 aa6.43□□□□□ -1.38
SMARCB1-207ENST00000491967 M0R1X1 148 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 PDCD5O14737 125 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 SLC25A17O43808 307 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 IGLV1-51P01701 117 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 APOA2P02652 100 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 CD3GP09693 182 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 GP9P14770 177 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 SPNP16150 400 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 FGF9P31371 208 aaPredicted RBP6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 HSPA13P48723 471 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 MECP2P51608 486 aaKnown RBP6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 PLGLAQ15195 96 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 HES5Q5TA89 166 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 UBE2UQ5VVX9 321 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 SBSPONQ8IVN8 264 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 TEX45Q8NA69 505 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 OR6Q1Q8NGQ2 317 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 OR10J5Q8NHC4 309 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 CLCC1Q96S66 551 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 SLC35D1Q9NTN3 355 aa6.42□□□□□ -1.38
SMARCB1-207ENST00000491967 IGKV1D-8A0A087WSZ0 117 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 A0A0G2JLM5 398 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 C3orf84H3BNL1 204 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 SAP30O75446 220 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 IGLV2-14P01704 120 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 RRASP10301 218 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 GNB3P16520 340 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 ZP3P21754 424 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 DTYMKP23919 212 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 CD40LGP29965 261 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 DUTP33316 252 aaKnown RBP6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 TPPP2P59282 170 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 UBE2KP61086 200 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 EIF4EBP1Q13541 118 aaPredicted RBP6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 ARL6IP1Q15041 203 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 KLK9Q2XQG4 91 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 ZNF343Q6P1L6 599 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 IZUMO2Q6UXV1 221 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 POC5Q8NA72 575 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 USMG5Q96IX5 58 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 ADTRPQ96IZ2 230 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 MS4A10Q96PG2 267 aa6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 THAP7Q9BT49 309 aaPredicted RBP6.41□□□□□ -1.38
SMARCB1-207ENST00000491967 TINAGL1Q9GZM7 467 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms