RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 HNRNPA3P51991 378 aaKnown RBP3.88□□□□□ -1.79
RTN4-215ENST00000491592 ZNF136P52737 540 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 SLC25A1P53007 311 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 CCL23P55773 120 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 FXYD6P3P58550 94 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 FABP9Q0Z7S8 132 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 DHRS2Q13268 280 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 FAM53BQ14153 422 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 KIR2DS5Q14953 304 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 SMIM21Q3B7S5 101 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 TIGITQ495A1 244 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 ZNF684Q5T5D7 378 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 TPTE2P1Q5T6R2 138 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
RTN4-215ENST00000491592 SPSB3Q6PJ21 355 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 Q6ZVQ6 151 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 HIST2H3AQ71DI3 136 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 GRINAQ7Z429 371 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 TMEM150AQ86TG1 271 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 SLC25A42Q86VD7 318 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 LRRC18Q8N456 261 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 ZADH2Q8N4Q0 377 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 OR5AK2Q8NH90 309 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 OR13C6PQ8NH95 151 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 WFDC5Q8TCV5 224 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 PPP1R1CQ8WVI7 109 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 HIST1H2BAQ96A08 127 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 PTX4Q96A99 478 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 EEF1AKMT3Q96AZ1 226 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 FGGYQ96C11 551 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 DDIT4LQ96D03 193 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 ZMYND19Q96E35 227 aaPredicted RBP3.88□□□□□ -1.79
RTN4-215ENST00000491592 SMIM8Q96KF7 97 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 OXGR1Q96P68 337 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 S100A13Q99584 98 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 WDR13Q9H1Z4 485 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 LINC00597Q9H2U6 94 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 SMDT1Q9H4I9 107 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 LHX9Q9NQ69 397 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 SPANXCQ9NY87 97 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 OR1A1Q9P1Q5 309 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 Q9UF83 564 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 CES1P1Q9UKY3 287 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 NOP16Q9Y3C1 178 aaKnown RBP3.88□□□□□ -1.79
RTN4-215ENST00000491592 ZNF780BQ9Y6R6 833 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 DOCK3Q8IZD9 2030 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 HEATR5BQ9P2D3 2071 aa3.88□□□□□ -1.79
RTN4-215ENST00000491592 TGIF2-C20orf24A0A0A6YYL0 155 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 CCL15-CCL14A0A0B4J2E2 113 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.87□□□□□ -1.79
RTN4-215ENST00000491592 A0A1B0GUV1 79 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.87□□□□□ -1.79
RTN4-215ENST00000491592 CEACAM18A8MTB9 384 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 ZNF736B4DX44 427 aaPredicted RBP3.87□□□□□ -1.79
RTN4-215ENST00000491592 PRAC2D3DTV9 90 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 C11orf98E9PRG8 122 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.87□□□□□ -1.79
RTN4-215ENST00000491592 M0R1B8 84 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 FCN1O00602 326 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 SLC17A2O00624 439 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 ZNHIT1O43257 154 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 ICOSLGO75144 302 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 DUS4LO95620 317 aaKnown RBP3.87□□□□□ -1.79
RTN4-215ENST00000491592 CLDN1O95832 211 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 CD3DP04234 171 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 CD37P11049 281 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 PVRP15151 417 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 OMGP23515 440 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 CXCR1P25024 350 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 AK4P27144 223 aaPredicted RBP3.87□□□□□ -1.79
RTN4-215ENST00000491592 S100A2P29034 98 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 AKR1C3P42330 323 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 RAB38P57729 211 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 HERV-K104P61576 105 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 NUTF2P61970 127 aaKnown RBP3.87□□□□□ -1.79
RTN4-215ENST00000491592 RPL8P62917 257 aaKnown RBP3.87□□□□□ -1.79
RTN4-215ENST00000491592 HIST1H3AP68431 136 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 MRPS11P82912 194 aaKnown RBP3.87□□□□□ -1.79
RTN4-215ENST00000491592 H3F3AP84243 136 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 RPL18AQ02543 176 aaKnown RBP3.87□□□□□ -1.79
RTN4-215ENST00000491592 SRSF9Q13242 221 aaKnown RBP eCLIP3.87□□□□□ -1.79
RTN4-215ENST00000491592 PMVKQ15126 192 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 RHEBQ15382 184 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 ZNF239Q16600 458 aaKnown RBP3.87□□□□□ -1.79
RTN4-215ENST00000491592 CCL15Q16663 113 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 LRRC75BQ2VPJ9 315 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 OR2B11Q5JQS5 317 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 ATP1A1-AS1Q5TC04 95 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 OTPQ5XKR4 325 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 RUSC1-AS1Q66K80 236 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 FAAP20Q6NZ36 180 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 SLC48A1Q6P1K1 146 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 SMIM20Q8N5G0 67 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 GATD1Q8NB37 220 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 ZNF439Q8NDP4 499 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 OR52E2Q8NGJ4 325 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 OR1P1Q8NH06 330 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 OR4K15Q8NH41 348 aa3.87□□□□□ -1.79
RTN4-215ENST00000491592 RGP1Q92546 391 aaPredicted RBP3.87□□□□□ -1.79
RTN4-215ENST00000491592 FAM3DQ96BQ1 224 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms