RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 SGPP2Q8IWX5 399 aa17.59■□□□□ 0.41
VCPKMT-204ENST00000491402 C17orf50Q8WW18 174 aa17.59■□□□□ 0.41
VCPKMT-204ENST00000491402 HLA-AP01891 365 aaKnown RBP17.58■□□□□ 0.41
VCPKMT-204ENST00000491402 CT45A6P0DMU7 189 aa17.58■□□□□ 0.41
VCPKMT-204ENST00000491402 CT45A5P0DMU8 189 aa17.58■□□□□ 0.41
VCPKMT-204ENST00000491402 CT45A7P0DMV0 189 aa17.58■□□□□ 0.41
VCPKMT-204ENST00000491402 CATR1Q13166 79 aa17.58■□□□□ 0.41
VCPKMT-204ENST00000491402 DHRS2Q13268 280 aa17.58■□□□□ 0.41
VCPKMT-204ENST00000491402 GLDNQ6ZMI3 551 aaPredicted RBP17.58■□□□□ 0.41
VCPKMT-204ENST00000491402 MRPL20Q9BYC9 149 aaKnown RBP17.58■□□□□ 0.41
VCPKMT-204ENST00000491402 HILPDAQ9Y5L2 63 aa17.58■□□□□ 0.41
VCPKMT-204ENST00000491402 RNF212BA8MTL3 300 aa17.58■□□□□ 0.4
VCPKMT-204ENST00000491402 PRAF2O60831 178 aa17.58■□□□□ 0.4
VCPKMT-204ENST00000491402 IL5P05113 134 aa17.58■□□□□ 0.4
VCPKMT-204ENST00000491402 ZNF816Q0VGE8 651 aaPredicted RBP17.58■□□□□ 0.4
VCPKMT-204ENST00000491402 FAM120AOSQ5T036 256 aa17.58■□□□□ 0.4
VCPKMT-204ENST00000491402 OR52B4Q8NGK2 314 aa17.58■□□□□ 0.4
VCPKMT-204ENST00000491402 TCTEX1D2Q8WW35 142 aa17.58■□□□□ 0.4
VCPKMT-204ENST00000491402 AJUBAQ96IF1 538 aa17.58■□□□□ 0.4
VCPKMT-204ENST00000491402 SEC22CQ9BRL7 303 aa17.58■□□□□ 0.4
VCPKMT-204ENST00000491402 LIN7CQ9NUP9 197 aaKnown RBP17.58■□□□□ 0.4
VCPKMT-204ENST00000491402 NIPBLQ6KC79 2804 aaeCLIP17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 C3orf85A0A1B0GTC6 90 aa17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 GAPDHP04406 335 aaKnown RBP17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 OR5AC1P0C628 307 aa17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 EPHA1P21709 976 aa17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 SSX2Q16385 188 aa17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 Q6ZNX1 250 aa17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 IL17RELQ6ZVW7 336 aa17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 LYG2Q86SG7 212 aa17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 ZNF383Q8NA42 475 aa17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 NANPQ8TBE9 248 aa17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 GALNT14Q96FL9 552 aa17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 TP53RKQ96S44 253 aa17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 MXRA5Q9NR99 2828 aa17.57■□□□□ 0.4
VCPKMT-204ENST00000491402 ZFHX3Q15911 3703 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 C9orf170A2RU37 121 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 INAFM1C9JVW0 142 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 TXNL1O43396 289 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 FSHBP01225 129 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 THBS3P49746 956 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 DYNAPQ8N1N2 210 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 DDB2Q92466 427 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 MALSU1Q96EH3 234 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 ADTRPQ96IZ2 230 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 NABP2Q9BQ15 211 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 KCNIP3Q9Y2W7 256 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 IGHV1-3A0A0C4DH29 117 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 H0Y980 276 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 SFT2D2O95562 160 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 PAX6P26367 422 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 SLC9A3R2Q15599 337 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 SP6Q3SY56 376 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 OR2B11Q5JQS5 317 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 C11orf88Q6PI97 169 aa17.56■□□□□ 0.4
VCPKMT-204ENST00000491402 FN1P02751 2386 aaKnown RBP17.55■□□□□ 0.4
VCPKMT-204ENST00000491402 A0A0A6YYJ9 748 aa17.55■□□□□ 0.4
VCPKMT-204ENST00000491402 A0A1W2PPI3 338 aa17.55■□□□□ 0.4
VCPKMT-204ENST00000491402 OOSP1A8MZH6 123 aa17.55■□□□□ 0.4
VCPKMT-204ENST00000491402 IFNA2P01563 188 aa17.55■□□□□ 0.4
VCPKMT-204ENST00000491402 BRWD1-AS2P59051 145 aa17.55■□□□□ 0.4
VCPKMT-204ENST00000491402 CASTOR1Q8WTX7 329 aa17.55■□□□□ 0.4
VCPKMT-204ENST00000491402 GPN1Q9HCN4 374 aaPredicted RBP17.55■□□□□ 0.4
VCPKMT-204ENST00000491402 NUP50Q9UKX7 468 aa17.55■□□□□ 0.4
VCPKMT-204ENST00000491402 PRELID3BQ9Y3B1 194 aa17.55■□□□□ 0.4
VCPKMT-204ENST00000491402 C7orf66A4D0T2 115 aa17.54■□□□□ 0.4
VCPKMT-204ENST00000491402 ANXA3P12429 323 aa17.54■□□□□ 0.4
VCPKMT-204ENST00000491402 BPIFB3P59826 476 aa17.54■□□□□ 0.4
VCPKMT-204ENST00000491402 CBX3Q13185 183 aa17.54■□□□□ 0.4
VCPKMT-204ENST00000491402 CCDC144NLQ6NUI1 221 aa17.54■□□□□ 0.4
VCPKMT-204ENST00000491402 OR8H3Q8N146 312 aa17.54■□□□□ 0.4
VCPKMT-204ENST00000491402 OR5AN1Q8NGI8 311 aa17.54■□□□□ 0.4
VCPKMT-204ENST00000491402 ZNF431Q8TF32 576 aaPredicted RBP17.54■□□□□ 0.4
VCPKMT-204ENST00000491402 GLYATL2Q8WU03 294 aa17.54■□□□□ 0.4
VCPKMT-204ENST00000491402 TMEM160Q9NX00 188 aa17.54■□□□□ 0.4
VCPKMT-204ENST00000491402 PRR13Q9NZ81 148 aa17.54■□□□□ 0.4
VCPKMT-204ENST00000491402 ALG5Q9Y673 324 aa17.54■□□□□ 0.4
VCPKMT-204ENST00000491402 ANK3Q12955 4377 aaKnown RBP17.54■□□□□ 0.4
VCPKMT-204ENST00000491402 H0YJW9 148 aa17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 RAMP3O60896 148 aa17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 B3GALNT1O75752 331 aa17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 SPAG16Q8N0X2 631 aa17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 TMEM222Q9H0R3 208 aa17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 A0A0U1RQK1 487 aa17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 TIMM23O14925 209 aa17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 CREBL2O60519 120 aaPredicted RBP17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 FCGR3BO75015 233 aa17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 DUS4LO95620 317 aaKnown RBP17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 UCP1P25874 307 aa17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 TMEM187Q14656 261 aa17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 MOB3BQ86TA1 216 aa17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 TEX29Q8N6K0 151 aa17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 TCTEX1D1Q8N7M0 179 aa17.53■□□□□ 0.4
VCPKMT-204ENST00000491402 SNRPGP15A8MWD9 76 aa17.52■□□□□ 0.4
VCPKMT-204ENST00000491402 ANKRD55Q3KP44 614 aa17.52■□□□□ 0.4
VCPKMT-204ENST00000491402 ZNF585BQ52M93 769 aa17.52■□□□□ 0.4
VCPKMT-204ENST00000491402 CD300LFQ8TDQ1 290 aa17.52■□□□□ 0.4
VCPKMT-204ENST00000491402 MITD1Q8WV92 249 aa17.52■□□□□ 0.4
VCPKMT-204ENST00000491402 RBMXL1Q96E39 390 aaKnown RBP17.52■□□□□ 0.4
VCPKMT-204ENST00000491402 SLC35D1Q9NTN3 355 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms