RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 IL1F10Q8WWZ1 152 aa8.19□□□□□ -1.1
TTC28-207ENST00000490475 GALMQ96C23 342 aa8.19□□□□□ -1.1
TTC28-207ENST00000490475 CMTM3Q96MX0 182 aa8.19□□□□□ -1.1
TTC28-207ENST00000490475 MARVELD1Q9BSK0 173 aa8.19□□□□□ -1.1
TTC28-207ENST00000490475 MIXL1Q9H2W2 232 aa8.19□□□□□ -1.1
TTC28-207ENST00000490475 Q9N2K0 584 aa8.19□□□□□ -1.1
TTC28-207ENST00000490475 COPZ2Q9P299 210 aa8.19□□□□□ -1.1
TTC28-207ENST00000490475 ZNF230Q9UIE0 474 aaPredicted RBP8.19□□□□□ -1.1
TTC28-207ENST00000490475 IGHV1-3A0A0C4DH29 117 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 NCBP2LA6PVI3 153 aaKnown RBP8.18□□□□□ -1.1
TTC28-207ENST00000490475 MFNGO00587 321 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 MOSP00540 346 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 C1QBP02746 253 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 ELANEP08246 267 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 CD3GP09693 182 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 HIST1H1DP16402 221 aaKnown RBP8.18□□□□□ -1.1
TTC28-207ENST00000490475 HTD2P86397 168 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 PNLIPRP3Q17RR3 467 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 CXorf66Q5JRM2 361 aaPredicted RBP8.18□□□□□ -1.1
TTC28-207ENST00000490475 SLC25A48Q6ZT89 311 aaKnown RBP8.18□□□□□ -1.1
TTC28-207ENST00000490475 MOB3BQ86TA1 216 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 ZNF329Q86UD4 541 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 ZNF695Q8IW36 515 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 MRPL41Q8IXM3 137 aaKnown RBP8.18□□□□□ -1.1
TTC28-207ENST00000490475 STPG2Q8N412 459 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 KLHL30-AS1Q8NEE0 82 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 OR8U1Q8NH10 309 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 MAFIPQ8WZ33 124 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 RBMXL1Q96E39 390 aaKnown RBP8.18□□□□□ -1.1
TTC28-207ENST00000490475 C7orf50Q9BRJ6 194 aaKnown RBP8.18□□□□□ -1.1
TTC28-207ENST00000490475 ABCG5Q9H222 651 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 C12orf4Q9NQ89 552 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 ABRACLQ9P1F3 81 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 ZNF580Q9UK33 172 aa8.18□□□□□ -1.1
TTC28-207ENST00000490475 IGKV1-6A0A0C4DH72 117 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 TRDCB7Z8K6 153 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 K7EIL1 84 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 YPEL1O60688 119 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 TPPPO94811 219 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 TALDO1P37837 337 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 CEACAM6P40199 344 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 GNG2P59768 71 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 CD69Q07108 199 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 FOXE3Q13461 319 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 HNF4GQ14541 408 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 PYDC2Q56P42 97 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 MOB1BQ7L9L4 216 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 Q8N402 240 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 ST6GALNAC6Q969X2 333 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 SLC25A38Q96DW6 304 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 EAF1Q96JC9 268 aaPredicted RBP8.17□□□□□ -1.1
TTC28-207ENST00000490475 HYLS1Q96M11 299 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 YPEL2Q96QA6 119 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 RASL11BQ9BPW5 248 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 PARP12Q9H0J9 701 aaKnown RBP8.17□□□□□ -1.1
TTC28-207ENST00000490475 C11orf54Q9H0W9 315 aaPredicted RBP8.17□□□□□ -1.1
TTC28-207ENST00000490475 OR1A1Q9P1Q5 309 aa8.17□□□□□ -1.1
TTC28-207ENST00000490475 TRAV18A0A075B6X5 111 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 IGKV1D-8A0A087WSZ0 117 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 IGHV3-72A0A0B4J1Y9 119 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 ANKRD34BA5PLL1 514 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 SH2D7A6NKC9 451 aaPredicted RBP8.16□□□□□ -1.1
TTC28-207ENST00000490475 PLA2G10O15496 165 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 LYRM1O43325 122 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 FCGR3AP08637 254 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 NHLRC4P0CG21 123 aaPredicted RBP8.16□□□□□ -1.1
TTC28-207ENST00000490475 GPR12P47775 334 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 OR3A3P47888 321 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 CDX1P47902 265 aaPredicted RBP8.16□□□□□ -1.1
TTC28-207ENST00000490475 INPP1P49441 399 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 ZNF137PP52743 207 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 HLA-DRB3P79483 266 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 DGCR2P98153 550 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 ARFRP1Q13795 201 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 ZNF260Q3ZCT1 412 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 IGSF11Q5DX21 431 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 C10orf99Q6UWK7 81 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 OR5M8Q8NGP6 311 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 RTN4IP1Q8WWV3 396 aaPredicted RBP8.16□□□□□ -1.1
TTC28-207ENST00000490475 NOL4LQ96MY1 436 aaPredicted RBP8.16□□□□□ -1.1
TTC28-207ENST00000490475 P2RX4Q99571 388 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 B9D2Q9BPU9 175 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 ST6GALNAC5Q9BVH7 336 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 SLC23A1Q9UHI7 598 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 JPT1Q9UK76 154 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 RNF150Q9ULK6 438 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 SPATA2Q9UM82 520 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 ETV7Q9Y603 341 aa8.16□□□□□ -1.1
TTC28-207ENST00000490475 FAM240BA0A1B0GVZ2 78 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 TMEM235A6NFC5 223 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 ZNF736B4DX44 427 aaPredicted RBP8.15□□□□□ -1.1
TTC28-207ENST00000490475 CCL24O00175 119 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 BET1O15155 118 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 ST8SIA5O15466 376 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 HSPA12AO43301 675 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 RGS11O94810 467 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 VDAC1P21796 283 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 ZBTB25P24278 435 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 SCAND1P57086 179 aa8.15□□□□□ -1.1
TTC28-207ENST00000490475 RRAS2P62070 204 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms