RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 PRSS27Q9BQR3 290 aa7.66□□□□□ -1.18
LSAMP-205ENST00000490035 SIP14410 1827 aa7.66□□□□□ -1.18
LSAMP-205ENST00000490035 MYO7BQ6PIF6 2116 aa7.66□□□□□ -1.18
LSAMP-205ENST00000490035 NACAE9PAV3 2078 aa7.66□□□□□ -1.18
LSAMP-205ENST00000490035 ZNF729A6NN14 1252 aaPredicted RBP7.66□□□□□ -1.18
LSAMP-205ENST00000490035 CA2P00918 260 aa7.66□□□□□ -1.18
LSAMP-205ENST00000490035 OR51G1Q8NGK1 321 aa7.66□□□□□ -1.18
LSAMP-205ENST00000490035 SFRP2Q96HF1 295 aa7.66□□□□□ -1.18
LSAMP-205ENST00000490035 TREM2Q9NZC2 230 aa7.66□□□□□ -1.18
LSAMP-205ENST00000490035 RALYQ9UKM9 306 aaKnown RBP7.66□□□□□ -1.18
LSAMP-205ENST00000490035 TRBV5-7A0A0A0MS05 114 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 FAM106AQ4KMX7 169 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 PILRAQ9UKJ1 303 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 MRPS18CQ9Y3D5 142 aaKnown RBP7.65□□□□□ -1.18
LSAMP-205ENST00000490035 PRNTQ86SH4 94 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 QTRT1Q9BXR0 403 aaKnown RBP7.65□□□□□ -1.18
LSAMP-205ENST00000490035 CLEC5AQ9NY25 188 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 MOB4Q9Y3A3 225 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 HSPE1P61604 102 aaKnown RBP7.65□□□□□ -1.18
LSAMP-205ENST00000490035 RPS4XP62701 263 aaKnown RBP7.65□□□□□ -1.18
LSAMP-205ENST00000490035 PDCD1Q15116 288 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 TM4SF20Q53R12 229 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 SCARF2Q96GP6 870 aaPredicted RBP7.65□□□□□ -1.18
LSAMP-205ENST00000490035 A0A0G2JMZ2 1700 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 LRRC37A2A6NM11 1700 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 A0A1W2PQM1 296 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 GPR6P46095 362 aaPredicted RBP7.65□□□□□ -1.18
LSAMP-205ENST00000490035 FAM181AQ8N9Y4 354 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 HIST1H2BAQ96A08 127 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 IDI2-AS1Q9NZ38 188 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 PHLDA3Q9Y5J5 127 aa7.65□□□□□ -1.18
LSAMP-205ENST00000490035 PMS2CLQ68D20 193 aa7.65□□□□□ -1.19
LSAMP-205ENST00000490035 RABAC1Q9UI14 185 aa7.65□□□□□ -1.19
LSAMP-205ENST00000490035 MRPS18BQ9Y676 258 aaKnown RBP7.65□□□□□ -1.19
LSAMP-205ENST00000490035 H7C1H1 209 aa7.65□□□□□ -1.19
LSAMP-205ENST00000490035 C8orf88P0DMB2 117 aa7.65□□□□□ -1.19
LSAMP-205ENST00000490035 PIMREGQ9BSJ6 248 aa7.65□□□□□ -1.19
LSAMP-205ENST00000490035 DOCK8Q8NF50 2099 aa7.65□□□□□ -1.19
LSAMP-205ENST00000490035 MGPP08493 103 aa7.65□□□□□ -1.19
LSAMP-205ENST00000490035 PSG4Q00888 419 aa7.65□□□□□ -1.19
LSAMP-205ENST00000490035 OR8A1Q8NGG7 326 aa7.65□□□□□ -1.19
LSAMP-205ENST00000490035 UBTD1Q9HAC8 227 aa7.65□□□□□ -1.19
LSAMP-205ENST00000490035 HSPB7Q9UBY9 170 aa7.65□□□□□ -1.19
LSAMP-205ENST00000490035 TMEM252Q8N6L7 170 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 LRRK1Q38SD2 2015 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 CD8AP01732 235 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 RPL24P83731 157 aaKnown RBP7.64□□□□□ -1.19
LSAMP-205ENST00000490035 TNFRSF9Q07011 255 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 OR10AC1Q8NH08 325 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 GATAD1Q8WUU5 269 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 DNASE2BQ8WZ79 361 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 LEPROTL1O95214 131 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 CD40P25942 277 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 PEBP1P30086 187 aaKnown RBP7.64□□□□□ -1.19
LSAMP-205ENST00000490035 HIKESHIQ53FT3 197 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 OTPQ5XKR4 325 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 VN1R17PQ8TDU5 208 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 HLA-DRB1P01911 266 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 DANCRP0C864 163 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 LINC00869P0C866 280 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 GPX4P36969 197 aaPredicted RBP7.64□□□□□ -1.19
LSAMP-205ENST00000490035 LRRC75AQ8NAA5 344 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 SPTBN1Q01082 2364 aaKnown RBP7.64□□□□□ -1.19
LSAMP-205ENST00000490035 RBFOX2O43251 390 aaKnown RBP eCLIP7.64□□□□□ -1.19
LSAMP-205ENST00000490035 SOD3P08294 240 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 C10orf128Q5T292 105 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 DOCK9Q9BZ29 2069 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 KBTBD11O94819 623 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 ADIPOQQ15848 244 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 SPINK9Q5DT21 86 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 CYB561D1Q8N8Q1 229 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 FADS6Q8N9I5 356 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 WFIKKN1Q96NZ8 548 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 KIR2DL4Q99706 377 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 MS4A7Q9GZW8 240 aaPredicted RBP7.64□□□□□ -1.19
LSAMP-205ENST00000490035 PHF3Q92576 2039 aaKnown RBP7.64□□□□□ -1.19
LSAMP-205ENST00000490035 ODAMA1E959 279 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 WDR25Q64LD2 544 aaPredicted RBP7.64□□□□□ -1.19
LSAMP-205ENST00000490035 KCNE5Q9UJ90 142 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 TRBV23-1A0A0A0MS06 115 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 CCL21O00585 134 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 SMIM10L1P0DMW3 83 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 LOXL3P58215 753 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 SNRPD3P62318 126 aaKnown RBP7.64□□□□□ -1.19
LSAMP-205ENST00000490035 LCN2P80188 198 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 OR4A47Q6IF82 309 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 OR1K1Q8NGR3 316 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 SMIM10Q96HG1 83 aa7.64□□□□□ -1.19
LSAMP-205ENST00000490035 FOXH1O75593 365 aa7.63□□□□□ -1.19
LSAMP-205ENST00000490035 OR1P1Q8NH06 330 aa7.63□□□□□ -1.19
LSAMP-205ENST00000490035 PLPPR2Q96GM1 343 aa7.63□□□□□ -1.19
LSAMP-205ENST00000490035 PAM16Q9Y3D7 125 aa7.63□□□□□ -1.19
LSAMP-205ENST00000490035 A0A1W2PQF6 199 aa7.63□□□□□ -1.19
LSAMP-205ENST00000490035 OR2H2O95918 312 aa7.63□□□□□ -1.19
LSAMP-205ENST00000490035 DDB2Q92466 427 aa7.63□□□□□ -1.19
LSAMP-205ENST00000490035 CD74P04233 296 aa7.63□□□□□ -1.19
LSAMP-205ENST00000490035 CELA2BP08218 269 aaPredicted RBP7.63□□□□□ -1.19
LSAMP-205ENST00000490035 AGAP20933 346 aa7.63□□□□□ -1.19
LSAMP-205ENST00000490035 LINC01559Q495D7 138 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms