RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 ADAM20O43506 726 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 ATG12O94817 140 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 SPDEFO95238 335 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 FSHBP01225 129 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 IGKV1-5P01602 117 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 SERPINE2P07093 398 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 OR8U9P0C7N5 309 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 FAM157CP0CG43 387 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 BTF3P20290 206 aaKnown RBP4.57□□□□□ -1.68
ATG4A-208ENST00000489247 AGAP20933 346 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 IL2RGP31785 369 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 NKX2-1P43699 371 aaPredicted RBP4.57□□□□□ -1.68
ATG4A-208ENST00000489247 TMEM33P57088 247 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 TAS2R30P59541 319 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 S100A10P60903 97 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 MEF2CQ06413 473 aaPredicted RBP4.57□□□□□ -1.68
ATG4A-208ENST00000489247 TFF3Q07654 80 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 BAXQ07812 192 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 AANATQ16613 207 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 C17orf58Q2M2W7 97 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 CD300EQ496F6 205 aaPredicted RBP4.57□□□□□ -1.68
ATG4A-208ENST00000489247 BEX5Q5H9J7 111 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 THOC7Q6I9Y2 204 aaKnown RBP4.57□□□□□ -1.68
ATG4A-208ENST00000489247 EIF5AL1Q6IS14 154 aaKnown RBP4.57□□□□□ -1.68
ATG4A-208ENST00000489247 ADAM5Q6NVV9 412 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 ALKAL2Q6UX46 152 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 MEX3BQ6ZN04 569 aaKnown RBP4.57□□□□□ -1.68
ATG4A-208ENST00000489247 TCF23Q7RTU1 214 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 COMMD7Q86VX2 200 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 C1orf87Q8N0U7 546 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 C8orf31Q8N9H6 132 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 ZNF439Q8NDP4 499 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 OR52L2PQ8NGH6 319 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 OR8U1Q8NH10 309 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 CD300LFQ8TDQ1 290 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 MRGPRDQ8TDS7 321 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 IL1F10Q8WWZ1 152 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 ARL11Q969Q4 196 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 GPR146Q96CH1 333 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 SAT2Q96F10 170 aaPredicted RBP4.57□□□□□ -1.68
ATG4A-208ENST00000489247 EGLN1Q9GZT9 426 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 ZNF665Q9H7R5 613 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 LYRM2Q9NU23 88 aaPredicted RBP4.57□□□□□ -1.68
ATG4A-208ENST00000489247 TAS2R3Q9NYW6 316 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 KAAG1Q9UBP8 84 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 LPAR3Q9UBY5 353 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 CLN8Q9UBY8 286 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 FBXL17Q9UF56 701 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 PPP1R3CQ9UQK1 317 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 LAMP3Q9UQV4 416 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 MMP24Q9Y5R2 645 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 MAP1BP46821 2468 aaKnown RBP4.57□□□□□ -1.68
ATG4A-208ENST00000489247 GTF3C1Q12789 2109 aa4.57□□□□□ -1.68
ATG4A-208ENST00000489247 TRAV38-1A0A0B4J264 116 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-208ENST00000489247 RAB19A4D1S5 217 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 ZNF729A6NN14 1252 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-208ENST00000489247 DEFB108AA8MXU0 73 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 TOR1AO14656 332 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 NDUFA2O43678 99 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 ZG16O60844 167 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 PROP1O75360 226 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 CLDN14O95500 239 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 SEC11BP0C7V7 166 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 IRF2P14316 349 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 PVALBP20472 110 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-208ENST00000489247 CD80P33681 288 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 SSTR5P35346 364 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 KIR2DS2P43631 304 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 SULT1A2P50226 295 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 RAB7AP51149 207 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 PAX9P55771 341 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 BRWD1-AS2P59051 145 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 HOXA4Q00056 320 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-208ENST00000489247 EWSR1Q01844 656 aaKnown RBP eCLIP4.56□□□□□ -1.68
ATG4A-208ENST00000489247 CATR1Q13166 79 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 GNMTQ14749 295 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 MORN2Q502X0 79 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 MIDNQ504T8 468 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 PDLIM3Q53GG5 364 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-208ENST00000489247 UQCC3Q6UW78 93 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 ODF3L1Q8IXM7 274 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 TMEM252Q8N6L7 170 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 LYPD6BQ8NI32 183 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 ZNF596Q8TC21 504 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 DDB2Q92466 427 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 SMIM8Q96KF7 97 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 RAB40CQ96S21 281 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 GINS3Q9BRX5 216 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 PARD6GQ9BYG4 376 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-208ENST00000489247 SLC25A31Q9H0C2 315 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 OR2D2Q9H210 308 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 IFI27L2Q9H2X8 130 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 OR2S2Q9NQN1 319 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 SDHAF2Q9NX18 166 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 CALYQ9NYX4 217 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 COQ3Q9NZJ6 369 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 CACFD1Q9UGQ2 172 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 NDRG3Q9UGV2 375 aa4.56□□□□□ -1.68
ATG4A-208ENST00000489247 RPUSD1Q9UJJ7 312 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms