RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CENPOQ9BU64 300 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 GPR61Q9BZJ8 451 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 KLK15Q9H2R5 256 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 TPSG1Q9NRR2 321 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 SDHAF2Q9NX18 166 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 RHBDL2Q9NX52 303 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 GAB2Q9UQC2 676 aa13.85□□□□□ -0.19
ITGB1-215ENST00000488494 FCN1O00602 326 aa13.84□□□□□ -0.19
ITGB1-215ENST00000488494 SCGNO76038 276 aa13.84□□□□□ -0.19
ITGB1-215ENST00000488494 IGLV1-40P01703 118 aa13.84□□□□□ -0.19
ITGB1-215ENST00000488494 KRTAP10-11P60412 298 aa13.84□□□□□ -0.19
ITGB1-215ENST00000488494 SRSF7Q16629 238 aaKnown RBP eCLIP13.84□□□□□ -0.19
ITGB1-215ENST00000488494 C19orf54Q5BKX5 351 aa13.84□□□□□ -0.19
ITGB1-215ENST00000488494 ZNF660Q6AZW8 331 aaPredicted RBP13.84□□□□□ -0.19
ITGB1-215ENST00000488494 H1FOOQ8IZA3 346 aaPredicted RBP13.84□□□□□ -0.19
ITGB1-215ENST00000488494 SLC25A38Q96DW6 304 aa13.84□□□□□ -0.19
ITGB1-215ENST00000488494 CLCC1Q96S66 551 aa13.84□□□□□ -0.19
ITGB1-215ENST00000488494 RNF5Q99942 180 aa13.84□□□□□ -0.19
ITGB1-215ENST00000488494 MCRIP2Q9BUT9 160 aaKnown RBP13.84□□□□□ -0.19
ITGB1-215ENST00000488494 GNB4Q9HAV0 340 aa13.84□□□□□ -0.19
ITGB1-215ENST00000488494 SLC35D1Q9NTN3 355 aa13.84□□□□□ -0.19
ITGB1-215ENST00000488494 RBM7Q9Y580 266 aaKnown RBP13.84□□□□□ -0.19
ITGB1-215ENST00000488494 A0A1W2PN81 502 aa13.83□□□□□ -0.2
ITGB1-215ENST00000488494 SLC25A17O43808 307 aa13.83□□□□□ -0.2
ITGB1-215ENST00000488494 CA2P00918 260 aa13.83□□□□□ -0.2
ITGB1-215ENST00000488494 CHRNA7P36544 502 aa13.83□□□□□ -0.2
ITGB1-215ENST00000488494 CRIP2P52943 208 aaPredicted RBP13.83□□□□□ -0.2
ITGB1-215ENST00000488494 GNG2P59768 71 aa13.83□□□□□ -0.2
ITGB1-215ENST00000488494 RPS16P62249 146 aaKnown RBP13.83□□□□□ -0.2
ITGB1-215ENST00000488494 IDNKQ5T6J7 187 aa13.83□□□□□ -0.2
ITGB1-215ENST00000488494 MINDY2Q8NBR6 621 aa13.83□□□□□ -0.2
ITGB1-215ENST00000488494 FLYWCH2Q96CP2 140 aaKnown RBP13.83□□□□□ -0.2
ITGB1-215ENST00000488494 FAM103A1Q9BTL3 118 aaKnown RBP13.83□□□□□ -0.2
ITGB1-215ENST00000488494 ST6GALNAC5Q9BVH7 336 aa13.83□□□□□ -0.2
ITGB1-215ENST00000488494 FOXA2Q9Y261 457 aaPredicted RBP13.83□□□□□ -0.2
ITGB1-215ENST00000488494 ETV7Q9Y603 341 aa13.83□□□□□ -0.2
ITGB1-215ENST00000488494 SOX15O60248 233 aa13.82□□□□□ -0.2
ITGB1-215ENST00000488494 EGFEM1PQ0D2K5 195 aa13.82□□□□□ -0.2
ITGB1-215ENST00000488494 FHL3Q13643 280 aa13.82□□□□□ -0.2
ITGB1-215ENST00000488494 OR5H6Q8NGV6 325 aa13.82□□□□□ -0.2
ITGB1-215ENST00000488494 CASTOR1Q8WTX7 329 aa13.82□□□□□ -0.2
ITGB1-215ENST00000488494 HARBI1Q96MB7 349 aa13.82□□□□□ -0.2
ITGB1-215ENST00000488494 OR5B12Q96R08 314 aa13.82□□□□□ -0.2
ITGB1-215ENST00000488494 SSX5O60225 188 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 EGR2P11161 476 aaPredicted RBP13.81□□□□□ -0.2
ITGB1-215ENST00000488494 LUMP51884 338 aaPredicted RBP13.81□□□□□ -0.2
ITGB1-215ENST00000488494 SCAND1P57086 179 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 PITPNAQ00169 270 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 CBX3Q13185 183 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 KIAA0141Q14154 515 aaPredicted RBP13.81□□□□□ -0.2
ITGB1-215ENST00000488494 ZNF260Q3ZCT1 412 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 PPP1R27Q86WC6 154 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 TCTEX1D1Q8N7M0 179 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 ZNF491Q8N8L2 437 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 TSPAN14Q8NG11 270 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 OR5M8Q8NGP6 311 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 GRPEL2Q8TAA5 225 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 ARPC1AQ92747 370 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 UBE2E2Q96LR5 201 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 DCSTAMPQ9H295 470 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 VCX3AQ9NNX9 186 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 VSIG4Q9Y279 399 aa13.81□□□□□ -0.2
ITGB1-215ENST00000488494 J3QRK9 145 aa13.8□□□□□ -0.2
ITGB1-215ENST00000488494 K7EIL1 84 aa13.8□□□□□ -0.2
ITGB1-215ENST00000488494 TNFAIP8O95379 198 aa13.8□□□□□ -0.2
ITGB1-215ENST00000488494 TGFBR1P36897 503 aa13.8□□□□□ -0.2
ITGB1-215ENST00000488494 RAB9AP51151 201 aa13.8□□□□□ -0.2
ITGB1-215ENST00000488494 GNB1P62873 340 aa13.8□□□□□ -0.2
ITGB1-215ENST00000488494 RTL8BQ17RB0 113 aa13.8□□□□□ -0.2
ITGB1-215ENST00000488494 TIMM50Q3ZCQ8 353 aa13.8□□□□□ -0.2
ITGB1-215ENST00000488494 UNQ5815/PRO19632Q6UWF5 114 aa13.8□□□□□ -0.2
ITGB1-215ENST00000488494 BVESQ8NE79 360 aa13.8□□□□□ -0.2
ITGB1-215ENST00000488494 OR11H1Q8NG94 326 aa13.8□□□□□ -0.2
ITGB1-215ENST00000488494 WI2-2373I1.2A0A1W2PRP0 233 aa13.79□□□□□ -0.2
ITGB1-215ENST00000488494 I3L521 148 aa13.79□□□□□ -0.2
ITGB1-215ENST00000488494 IGLV2-23P01705 113 aa13.79□□□□□ -0.2
ITGB1-215ENST00000488494 NFYAP23511 347 aaPredicted RBP13.79□□□□□ -0.2
ITGB1-215ENST00000488494 ACTBL2Q562R1 376 aa13.79□□□□□ -0.2
ITGB1-215ENST00000488494 ZNF562Q6V9R5 426 aa13.79□□□□□ -0.2
ITGB1-215ENST00000488494 NUBP2Q9Y5Y2 271 aa13.79□□□□□ -0.2
ITGB1-215ENST00000488494 TRAV18A0A075B6X5 111 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 A0A087WXM4 84 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 ARPC1BO15143 372 aaKnown RBP13.78□□□□□ -0.2
ITGB1-215ENST00000488494 AIREO43918 545 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 DUTP33316 252 aaKnown RBP13.78□□□□□ -0.2
ITGB1-215ENST00000488494 SSBP2P81877 361 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-215ENST00000488494 RUNX1Q01196 453 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 TAGLNQ01995 201 aaKnown RBP13.78□□□□□ -0.2
ITGB1-215ENST00000488494 ZNF616Q08AN1 781 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 TMEM267Q0VDI3 215 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-215ENST00000488494 FXYD3Q14802 87 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 ASPHD1Q5U4P2 390 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 PYHIN1Q6K0P9 492 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 ZNF645Q8N7E2 425 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 LFNGQ8NES3 379 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 DDB2Q92466 427 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 YIPF6Q96EC8 236 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 ADTRPQ96IZ2 230 aa13.78□□□□□ -0.2
ITGB1-215ENST00000488494 ALX4Q9H161 411 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-215ENST00000488494 ANXA10Q9UJ72 324 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms