RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 GLAP06280 429 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 GBX2P52951 348 aaPredicted RBP6.85□□□□□ -1.31
COL17A1-207ENST00000488320 MFAP2P55001 183 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 SSBP2P81877 361 aaPredicted RBP6.85□□□□□ -1.31
COL17A1-207ENST00000488320 FAM106AQ4KMX7 169 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 GLIPR1L1Q6UWM5 242 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 PDPNQ86YL7 162 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 MAPKAPK5-AS1Q8N8E1 139 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 SETD6Q8TBK2 473 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 FAM46BQ96A09 425 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 ZNF184Q99676 751 aaPredicted RBP6.85□□□□□ -1.31
COL17A1-207ENST00000488320 SULT4A1Q9BR01 284 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 BANF2Q9H503 90 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 ISG20L2Q9H9L3 353 aaKnown RBP6.85□□□□□ -1.31
COL17A1-207ENST00000488320 SLC35D1Q9NTN3 355 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 ZNF221Q9UK13 617 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 GMPPBQ9Y5P6 360 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 HSPG2P98160 4391 aa6.85□□□□□ -1.31
COL17A1-207ENST00000488320 TRAV25A0A0B4J276 109 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 E9PI62 339 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 G3V2T6 193 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 RTL8CO15255 209 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 CRTAPO75718 401 aaPredicted RBP6.84□□□□□ -1.31
COL17A1-207ENST00000488320 FCGR2BP31994 310 aaPredicted RBP6.84□□□□□ -1.31
COL17A1-207ENST00000488320 CAPGP40121 348 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 CEACAM6P40199 344 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 LINC00205P59089 165 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 MRPL28Q13084 256 aaKnown RBP6.84□□□□□ -1.31
COL17A1-207ENST00000488320 TNXAQ16473 311 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 FAM209BQ5JX69 171 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 OR4A47Q6IF82 309 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 BTNL8Q6UX41 500 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 NR2C2APQ86WQ0 139 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 GPHB5Q86YW7 130 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 ZNF383Q8NA42 475 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 GPR148Q8TDV2 347 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 MUL1Q969V5 352 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 GALNT14Q96FL9 552 aa6.84□□□□□ -1.31
COL17A1-207ENST00000488320 CHMP1AQ9HD42 196 aaPredicted RBP6.84□□□□□ -1.31
COL17A1-207ENST00000488320 FAM90A7PA6NKC0 464 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 C11orf94C9JXX5 98 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 J3QRE1 110 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 SHOXO15266 292 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 PDCD6O75340 191 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 DCTN3O75935 186 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 OR2J3O76001 311 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 CRYGBP07316 175 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 ARL3P36405 182 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 POLR2IP36954 125 aaKnown RBP6.83□□□□□ -1.32
COL17A1-207ENST00000488320 CBX3Q13185 183 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 HMGN3Q15651 99 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 C15orf32Q32M92 178 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 ZNF585BQ52M93 769 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 KDM4DQ6B0I6 523 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 AWAT2Q6E213 333 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 ZDHHC13Q8IUH4 622 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 CENPSQ8N2Z9 138 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 JAGN1Q8N5M9 183 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 NECAP1Q8NC96 275 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 OR11H2Q8NH07 326 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 OR5B3Q8NH48 314 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 EDARADDQ8WWZ3 215 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 ACOT12Q8WYK0 555 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 ORAI1Q96D31 301 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 CYYR1Q96J86 154 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 HARBI1Q96MB7 349 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 THTPAQ9BU02 230 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 C6orf62Q9GZU0 229 aaPredicted RBP6.83□□□□□ -1.32
COL17A1-207ENST00000488320 C11orf54Q9H0W9 315 aaPredicted RBP6.83□□□□□ -1.32
COL17A1-207ENST00000488320 IMPAD1Q9NX62 359 aa6.83□□□□□ -1.32
COL17A1-207ENST00000488320 TRBV9A0A0B4J1U6 114 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 TMEM213A2RRL7 107 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 SNTNA6NMZ2 147 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 M0R1X1 148 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 ITGB1BP1O14713 200 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 DEFB4AO15263 64 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 IGLV2-23P01705 113 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 IGHV3-23P01764 117 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 SCTP09683 121 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 MGMTP16455 207 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 GTF2A1P52655 376 aaPredicted RBP6.82□□□□□ -1.32
COL17A1-207ENST00000488320 SNRPGP62308 76 aaKnown RBP6.82□□□□□ -1.32
COL17A1-207ENST00000488320 MED21Q13503 144 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 HSP90B2PQ58FF3 399 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 GLT8D1Q68CQ7 371 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 CLEC19AQ6UXS0 136 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 SYS1Q8N2H4 156 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 ZNF645Q8N7E2 425 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 OR4A5Q8NH83 315 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 TRUB1Q8WWH5 349 aaKnown RBP6.82□□□□□ -1.32
COL17A1-207ENST00000488320 NEDD4LQ96PU5 975 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 OR14A2Q96R54 314 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 AGMATQ9BSE5 352 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 CSTL1Q9H114 145 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 MAP6D1Q9H9H5 199 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 EXOGQ9Y2C4 368 aaKnown RBP6.82□□□□□ -1.32
COL17A1-207ENST00000488320 DMRT1Q9Y5R6 373 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 HERC1Q15751 4861 aa6.82□□□□□ -1.32
COL17A1-207ENST00000488320 MPTX1A8MV57 137 aa6.81□□□□□ -1.32
COL17A1-207ENST00000488320 PROP1O75360 226 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms