RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 IGHV1-8P0DP01 117 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 HKR1P10072 659 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 EPHA1P21709 976 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 AKR1C2P52895 323 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 ZNF816Q0VGE8 651 aaPredicted RBP7.73□□□□□ -1.17
SF3B1-211ENST00000487698 IZUMO4Q1ZYL8 232 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 CXorf66Q5JRM2 361 aaPredicted RBP7.73□□□□□ -1.17
SF3B1-211ENST00000487698 SLC51BQ86UW2 128 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 LYG1Q8N1E2 194 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 LINC00311Q8N616 119 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 CD300LFQ8TDQ1 290 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 RAB39BQ96DA2 213 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 PATZ1Q9HBE1 687 aaKnown RBP7.73□□□□□ -1.17
SF3B1-211ENST00000487698 COA4Q9NYJ1 87 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 NSG2Q9Y328 171 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 MMP24Q9Y5R2 645 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 ARHGAP32A7KAX9 2087 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 KANTRA0A1W2PQU2 76 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 EXOSC2Q13868 293 aaKnown RBP7.72□□□□□ -1.17
SF3B1-211ENST00000487698 LY6G5BQ8NDX9 201 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 ZNRD1Q9P1U0 126 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 CACNG5Q9UF02 275 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 C22orf46C9J442 243 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 ATG12O94817 140 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 G6PCP35575 357 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 NUP62P37198 522 aaPredicted RBP7.72□□□□□ -1.17
SF3B1-211ENST00000487698 KIR2DS2P43631 304 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 GPR6P46095 362 aaPredicted RBP7.72□□□□□ -1.17
SF3B1-211ENST00000487698 P2RY1P47900 373 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 THBS3P49746 956 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 MIDNQ504T8 468 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 ZNF833PQ6ZTB9 187 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 ZNF383Q8NA42 475 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 RNASE11Q8TAA1 199 aaKnown RBP7.72□□□□□ -1.17
SF3B1-211ENST00000487698 ADTRPQ96IZ2 230 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 ARPC5LQ9BPX5 153 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 PLEKHA2Q9HB19 425 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 SESN1Q9Y6P5 492 aa7.72□□□□□ -1.17
SF3B1-211ENST00000487698 PPIAL4CA0A0B4J2A2 164 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 J3QR06 171 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 FCGR3BO75015 233 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 HPRT1P00492 218 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 KRASP01116 189 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 IFNA7P01567 189 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 IGHV4-39P01824 125 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 PPIAL4GP0DN37 164 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 MMP9P14780 707 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 RPL12P30050 165 aaKnown RBP7.71□□□□□ -1.18
SF3B1-211ENST00000487698 ZNF137PP52743 207 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 POLR2GP62487 172 aaKnown RBP eCLIP7.71□□□□□ -1.18
SF3B1-211ENST00000487698 ZNF295-AS1Q8N0V1 137 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 S1PR3Q99500 378 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 TMEM133Q9H2Q1 129 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 CYTL1Q9NRR1 136 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 PRELID3BQ9Y3B1 194 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 SPG11Q96JI7 2443 aa7.71□□□□□ -1.18
SF3B1-211ENST00000487698 A0A1W2PPH5 198 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 MARCH11A6NNE9 402 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 SSSCA1O60232 199 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 TMEM50AO95807 157 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 UBA52P62987 128 aaKnown RBP7.7□□□□□ -1.18
SF3B1-211ENST00000487698 FAM71F2Q6NXP2 309 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 OR9G1Q8NH87 305 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 STOML3Q8TAV4 291 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 ST8SIA2Q92186 375 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 ST6GALNAC6Q969X2 333 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 R3HDM4Q96D70 268 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 SSBP3Q9BWW4 388 aaPredicted RBP7.7□□□□□ -1.18
SF3B1-211ENST00000487698 MAGT1Q9H0U3 335 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 USP9YO00507 2555 aaPredicted RBP7.7□□□□□ -1.18
SF3B1-211ENST00000487698 TET2Q6N021 2002 aaPredicted RBP7.7□□□□□ -1.18
SF3B1-211ENST00000487698 FAM90A26D6RGX4 464 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 SPDEFO95238 335 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 LIPFP07098 398 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 CT45A6P0DMU7 189 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 CT45A5P0DMU8 189 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 CT45A7P0DMV0 189 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 GNB2P62879 340 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 AARDQ4LEZ3 155 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 GPR157Q5UAW9 335 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 ZNF525Q8N782 197 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 OR4S2Q8NH73 311 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 CCL19Q99731 98 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 ZNF471Q9BX82 626 aaPredicted RBP7.7□□□□□ -1.18
SF3B1-211ENST00000487698 NARFLQ9H6Q4 476 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 LYRM2Q9NU23 88 aaPredicted RBP7.7□□□□□ -1.18
SF3B1-211ENST00000487698 UBQLN2Q9UHD9 624 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 ABCA2Q9BZC7 2435 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 TACC2O95359 2948 aa7.7□□□□□ -1.18
SF3B1-211ENST00000487698 RPS10-NUDT3A0A1W2PQS6 291 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 FAM90A9PA6NNJ1 464 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 TOR1AO14656 332 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 GPR137BO60478 399 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 NXPH3O95157 252 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 IGLV1-47P01700 117 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 IGHV2-5P01817 119 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 PVALBP20472 110 aaPredicted RBP7.69□□□□□ -1.18
SF3B1-211ENST00000487698 HTR2BP41595 481 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 PAX9P55771 341 aa7.69□□□□□ -1.18
SF3B1-211ENST00000487698 NDUFA5Q16718 116 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms