RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SSMEM1Q8WWF3 244 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 CARHSP1Q9Y2V2 147 aaKnown RBP10□□□□□ -0.81
TRA2B-214ENST00000487615 CSRP1P21291 193 aaKnown RBP10□□□□□ -0.81
TRA2B-214ENST00000487615 IL19Q9UHD0 177 aa10□□□□□ -0.81
TRA2B-214ENST00000487615 GALR1P47211 349 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 CENPFP49454 3210 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 PAGE4O60829 102 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 NAPSAO96009 420 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 PRRX1P54821 245 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 B2MP61769 119 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 SRSF7Q16629 238 aaKnown RBP eCLIP9.99□□□□□ -0.811e-8■□□□□ 9.4
TRA2B-214ENST00000487615 ASCL4Q6XD76 172 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 ASCL5Q7RTU5 278 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 J3QR06 171 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 K7N7A8 449 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 ZG16O60844 167 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 DKK1O94907 266 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 ATRAIDQ6UW56 229 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 TGIF2LYQ8IUE0 185 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 TGIF2LXQ8IUE1 241 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 ZNF355PQ9NSJ1 428 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 ZNF581Q9P0T4 197 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 RSPO1Q2MKA7 263 aaPredicted RBP9.99□□□□□ -0.81
TRA2B-214ENST00000487615 ZNRF1Q8ND25 227 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 FLYWCH2Q96CP2 140 aaKnown RBP9.99□□□□□ -0.81
TRA2B-214ENST00000487615 MEGF10Q96KG7 1140 aa9.99□□□□□ -0.81
TRA2B-214ENST00000487615 RPS2P15880 293 aaKnown RBP9.98□□□□□ -0.81
TRA2B-214ENST00000487615 TOLLIPQ9H0E2 274 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 A0A1W2PN81 502 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 SCGB1D1O95968 90 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 CHRNA7P36544 502 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 TEPPQ6URK8 271 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 ZNF497Q6ZNH5 498 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 SLC24A4Q8NFF2 622 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 ZDHHC11Q9H8X9 412 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 ZNF331Q9NQX6 463 aaPredicted RBP9.98□□□□□ -0.81
TRA2B-214ENST00000487615 ONECUT1Q9UBC0 465 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 POLEQ07864 2286 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 AP4M1O00189 453 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 MPDU1O75352 247 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 OR4A8P0C604 315 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 COX7A1P24310 79 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 FAM78BQ5VT40 261 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 COLCA1Q6ZS62 124 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 RARRES2Q99969 163 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 ANAPC10Q9UM13 185 aa9.98□□□□□ -0.81
TRA2B-214ENST00000487615 G3V3Q6 166 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 PPIHO43447 177 aaKnown RBP9.97□□□□□ -0.81
TRA2B-214ENST00000487615 ERVFC1-1P60608 527 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 SMUG1Q53HV7 270 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 ETFRF1Q6IPR1 90 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 KDF1Q8NAX2 398 aaPredicted RBP9.97□□□□□ -0.81
TRA2B-214ENST00000487615 OR13A1Q8NGR1 328 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 PSMG3Q9BT73 122 aaPredicted RBP9.97□□□□□ -0.81
TRA2B-214ENST00000487615 NPVFQ9HCQ7 196 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 PCNX1Q96RV3 2341 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 CYB5R3P00387 301 aaPredicted RBP9.97□□□□□ -0.81
TRA2B-214ENST00000487615 DEFA6Q01524 100 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 MEF2BQ02080 365 aaPredicted RBP9.97□□□□□ -0.81
TRA2B-214ENST00000487615 OR4D5Q8NGN0 318 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 ZNF714Q96N38 554 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 CTDSP1Q9GZU7 261 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 RAB1BQ9H0U4 201 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 CYTL1Q9NRR1 136 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 PCNX3Q9H6A9 2034 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 TECTAO75443 2155 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 K7EQM0 130 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 CNN1P51911 297 aaKnown RBP9.97□□□□□ -0.81
TRA2B-214ENST00000487615 ID3Q02535 119 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 FAM27E3Q08E93 113 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 RAB1CQ92928 201 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 MISP3Q96FF7 219 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 RPRMQ9NS64 109 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 TMEM140Q9NV12 185 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 PKDREJQ9NTG1 2253 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 NCOA6Q14686 2063 aaPredicted RBP9.97□□□□□ -0.81
TRA2B-214ENST00000487615 OR10J4P0C629 311 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 NTF4P34130 210 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 OR1L8Q8NGR8 309 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 OR51B2Q9Y5P1 312 aa9.97□□□□□ -0.81
TRA2B-214ENST00000487615 ZNF324BQ6AW86 544 aaPredicted RBP9.96□□□□□ -0.81
TRA2B-214ENST00000487615 DHRS7BQ6IAN0 325 aaPredicted RBP9.96□□□□□ -0.81
TRA2B-214ENST00000487615 REG4Q9BYZ8 158 aa9.96□□□□□ -0.81
TRA2B-214ENST00000487615 TMEM167BQ9NRX6 74 aa9.96□□□□□ -0.81
TRA2B-214ENST00000487615 CADP27708 2225 aa9.96□□□□□ -0.81
TRA2B-214ENST00000487615 IGLV3-1P01715 115 aa9.96□□□□□ -0.81
TRA2B-214ENST00000487615 WDR82Q6UXN9 313 aa9.96□□□□□ -0.81
TRA2B-214ENST00000487615 TMEM37Q8WXS4 190 aa9.96□□□□□ -0.81
TRA2B-214ENST00000487615 LEAP2Q969E1 77 aa9.96□□□□□ -0.81
TRA2B-214ENST00000487615 TMPRSS5Q9H3S3 457 aa9.96□□□□□ -0.81
TRA2B-214ENST00000487615 TECRQ9NZ01 308 aaKnown RBP9.96□□□□□ -0.81
TRA2B-214ENST00000487615 IDI2-AS1Q9NZ38 188 aa9.96□□□□□ -0.81
TRA2B-214ENST00000487615 AMMECR1Q9Y4X0 333 aaPredicted RBP9.96□□□□□ -0.81
TRA2B-214ENST00000487615 ZNF318Q5VUA4 2279 aa9.96□□□□□ -0.82
TRA2B-214ENST00000487615 WIPF3A6NGB9 483 aa9.96□□□□□ -0.82
TRA2B-214ENST00000487615 PDE6DO43924 150 aa9.96□□□□□ -0.82
TRA2B-214ENST00000487615 REG1BP48304 166 aa9.96□□□□□ -0.82
TRA2B-214ENST00000487615 UCNP55089 124 aa9.96□□□□□ -0.82
TRA2B-214ENST00000487615 OR4P4Q8NGL7 312 aa9.96□□□□□ -0.82
TRA2B-214ENST00000487615 WDR61Q9GZS3 305 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms